Rv0006 - c.1881T>G
Drug resistance types
1 Sensitive
2 RR-TB
10 HR-TB
3 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9 | 2 |
| lineage5.2 | 2 |
| lineage4.9 | 6 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 3 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 27 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR10808730 | Other | lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675280 | RR-TB | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR3283042 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None |
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