Rv1173 - c.540T>G


Drug resistance types
22 Sensitive 1 RR-TB 164 HR-TB 8 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 77 Other
lineage Counts
lineage Count
La1.8.1 1
lineage4.9 17
176
lineage4.1.1 1
lineage4 28
lineage2.2.1 9
lineage3 3
lineage4.1.2.1 5
lineage2.2.1.1 2
lineage2.2 9
lineage3.1 3
La2 1
lineage4.4.1.2 1
La1 1
lineage3.1.2 1
lineage2 2
lineage4.6.1.1 2
lineage4.3.2 1
lineage6.3.1 1
lineage3.1.2.2;lineage3.1.2.1 1
La3 1
lineage4.4.1.1 1
lineage4.3.3 1
lineage4.5 1
lineage9;lineage3.1 1
lineage4.1 2
lineage6.3;lineage4.9;lineage2.1 1
lineage4.3.4 1
lineage3;lineage2.1 1
lineage4.3 1
lineage2.1 1
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 278
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4818021 Other La1.8.1 None
ERR4818110 Sensitive lineage4.9 None
ERR234659 HR-TB None
ERR2229143 Other lineage4.1.1 None
ERR4818929 HR-TB None
SRR5341432 HR-TB lineage4 None
SRR5007188 Other lineage4 None
SRR5341373 HR-TB lineage4 None
SRR5341418 Other None
ERR1035138 MDR-TB None
SRR5341456 Other None
SRR5341313 HR-TB None
ERR4819781 Other lineage2.2.1 None
ERR2514692 Other None
SRR5341302 HR-TB None
SRR6044875 HR-TB lineage4.9 None
ERR4821053 Other lineage3 None
ERR2693230 Other None
ERR2693254 Other None
SRR6045503 HR-TB None
ERR2693257 Other None
SRR6045526 HR-TB None
SRR5535933 HR-TB None
SRR6045519 HR-TB None
SRR6045795 HR-TB lineage2.2.1 None
SRR6044780 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6044835 Sensitive lineage4 None
SRR5341333 HR-TB None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
ERR2693231 Other None
SRR5341470 HR-TB None
ERR2693239 HR-TB None
ERR278594 HR-TB None
SRR6044890 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6045010 Other lineage4 None
SRR6045053 Other None
SRR6045217 Other lineage4 None
SRR6045233 HR-TB None
SRR6046046 Other None
SRR6325448 HR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6046225 HR-TB None
SRR6325442 HR-TB None
SRR6046299 HR-TB None
SRR6325444 HR-TB None
SRR6046397 Other None
SRR6046492 Other None
SRR6045327 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046482 HR-TB None
SRR6046514 HR-TB None
SRR6046611 HR-TB lineage4.9 None
SRR6046540 HR-TB None
SRR6046824 HR-TB None
SRR6046644 HR-TB None
SRR6325447 HR-TB None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6046878 HR-TB lineage4 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4831638 Sensitive None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
ERR294248 HR-TB None
ERR323036 HR-TB None
SRR6789626 Other None
ERR323034 HR-TB lineage3.1 None
ERR502889 Other None
ERR502532 HR-TB None
ERR502524 HR-TB La2 None
ERR5311099 HR-TB None
ERR5311090 HR-TB None
ERR5311081 HR-TB None
SRR8217918 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR7496517 Other None
SRR7496509 Other None
ERR323043 HR-TB None
ERR323038 HR-TB None
ERR323039 HR-TB None
ERR323041 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323053 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323055 HR-TB None
ERR1034652 Other None
ERR323063 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR067681 HR-TB None
ERR067699 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1035157 Other lineage4.9 None
ERR1063839 HR-TB lineage2.2 None
ERR1063857 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR133825 Sensitive lineage4 None
ERR133986 HR-TB None
ERR3468544 HR-TB None
ERR3283025 HR-TB None
ERR3283028 Other None
ERR3283027 HR-TB None
ERR3283031 HR-TB None
ERR3439432 Other None
ERR3283017 HR-TB None
ERR3283014 HR-TB None
ERR3283024 Other None
ERR3283032 HR-TB None
ERR3283040 HR-TB None
ERR3283036 HR-TB None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3445504 HR-TB None
ERR3797048 HR-TB None
ERR3797016 HR-TB None
ERR3797015 HR-TB None
ERR3797014 Other None
ERR3797017 Other None
ERR3797043 HR-TB None
ERR3797044 Other None
ERR3797080 HR-TB lineage4.9 None
ERR3797065 MDR-TB lineage4 None
ERR3797061 Other None
ERR3797069 Other None
ERR3797063 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797087 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR400345 Other lineage4 None
ERR400336 Sensitive lineage4 None
ERR4188350 HR-TB None
ERR403298 HR-TB lineage4 None
ERR4769521 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4407463 HR-TB None
ERR473332 Other lineage4 None
ERR473334 HR-TB lineage4.9 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR4796929 Sensitive lineage4 None
ERR4798262 HR-TB La1 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4798406 HR-TB None
ERR4810624 HR-TB lineage2.2 None
ERR4800341 Other lineage3 None
ERR4799513 HR-TB lineage2.2 None
ERR4811022 HR-TB None
ERR4810741 HR-TB None
ERR4811105 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR4812155 Sensitive None
ERR4811142 MDR-TB None
ERR5336148 Other None
ERR6359045 HR-TB None
ERR6358979 Other None
ERR6358991 HR-TB None
ERR6358837 HR-TB None
ERR6359069 Other lineage4.9 None
ERR6866807 HR-TB lineage4 None
ERR702406 HR-TB None
ERR702404 HR-TB None
ERR736865 HR-TB None
ERR736839 Other None
ERR736867 HR-TB None
ERR736875 HR-TB lineage4 None
ERR9117709 HR-TB None
ERR736874 HR-TB None
ERR772255 MDR-TB lineage4.3.2 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR8976043 HR-TB None
ERR9119669 HR-TB None
ERR9786604 Other None
ERR9787139 Other lineage6.3.1 None
ERR9786671 Other None
ERR9786694 Other lineage4.1.2.1 None
ERR9786843 Other None
ERR9787197 Other None
ERR987733 RR-TB lineage4.6.1.1 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR987722 HR-TB None
SRR10808399 Sensitive lineage4 None
SRR1169249 Other La3 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1167384 Other lineage4 None
SRR1172951 Other None
SRR1169306 Other None
SRR1172310 HR-TB None
SRR1172817 HR-TB None
SRR1172146 Sensitive lineage4.9 None
SRR1172728 MDR-TB None
SRR1173453 Other lineage4.4.1.1 None
SRR1173384 Other lineage4 None
SRR1173629 Other None
SRR1173633 HR-TB lineage4.9 None
SRR1174897 HR-TB None
SRR1173778 Other None
SRR1184381 MDR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1180137 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1181020 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1183144 Other lineage2.2.1 None
SRR1184294 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1184380 HR-TB None
SRR1196546 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR12416824 HR-TB None
SRR12142341 HR-TB None
SRR13837766 Sensitive lineage4.9 None
SRR14782405 HR-TB None
SRR15368973 Other None
SRR19303884 HR-TB None
SRR1640750 HR-TB None
SRR17832802 HR-TB lineage3 None
SRR18213713 HR-TB lineage4.5 None
SRR19304036 HR-TB None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR20969677 HR-TB lineage2 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR12708416 Sensitive lineage4.1 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
ERR4815604 HR-TB None
ERR1035239 HR-TB None
SRR6325445 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR3675465 HR-TB None
SRR3675488 HR-TB None
ERR158583 HR-TB None
SRR3675482 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR161033 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
SRR3675222 Other None
SRR3675486 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR181744 HR-TB None
SRR3675221 HR-TB None
SRR3675501 HR-TB None
SRR3675234 Other None
SRR3675236 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675270 HR-TB None
ERR176643 HR-TB None
SRR3675311 Other None
ERR176740 HR-TB None
SRR3675383 HR-TB None
SRR3675510 Other None
SRR3675387 Sensitive None
ERR176751 HR-TB None
ERR212001 HR-TB None
SRR3675545 HR-TB None
SRR3675550 Other None
SRR5341422 HR-TB lineage2.1 None
ERR212034 HR-TB None
ERR212033 HR-TB None
SRR3675558 HR-TB None
SRR3675571 HR-TB None
ERR212123 Other None
SRR3675574 HR-TB None
ERR212121 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816466 HR-TB None
ERR4816656 HR-TB None
SRR3742665 HR-TB None
ERR4817896 HR-TB lineage2.2.1 None