Rv0006 - c.-182T>C


Drug resistance types
39 Sensitive 3 RR-TB 43 HR-TB 10 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 53 Other
lineage Counts
lineage Count
lineage4.1.2.1 3
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.9 78
La1.7.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
La1.2.BCG 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.9 2
lineage4.4.1.1.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.1.3 1
M.canetti;lineage4.2;lineage4.9 2
lineage4.1;lineage4.9 1
lineage4.8 2
M.canetti;lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4 5
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.7;lineage4.9 4
M.canetti;lineage4.9 4
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage6.1.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage2.2.1 3
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.3.4 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.1;lineage4.9 1
lineage4.3.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.4.1.2 1
lineage4.3.4.1 1
lineage2.2 1
lineage2.2.1.1 1
lineage4.6.3;lineage4.9 1
lineage1.1.1 1
La1.7;M.canetti;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 1
lineage3.1;lineage9 1
lineage1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 151
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6865513 Other lineage4.1.2.1 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR363447 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR6046485 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR176651 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
SRR6046046 Other lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR363502 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR1023236 Other lineage6.1.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR26399265 Other lineage2.2.1 None
ERR3283018 HR-TB lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR369162 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR4769439 HR-TB lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR369163 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4820773 HR-TB lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR363421 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR10809074 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR363449 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4815441 HR-TB lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR8217918 HR-TB lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1063849 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
SRR29050859 Other lineage4.9 None
ERR373947 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR212125 HR-TB lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR6359082 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR363456 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR363500 Sensitive lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4818929 HR-TB lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR369158 Other lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR3675267 Other La1.7;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None