Rv0006 - c.-992G>C
Drug resistance types
23 Sensitive
0 RR-TB
68 HR-TB
1 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 4 |
| lineage2.2.1 | 5 |
| lineage4.9 | 19 |
| lineage1.1.1 | 1 |
| 61 | |
| lineage7;lineage2.2.1.2 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4 | 22 |
| lineage4;lineage2.2 | 1 |
| lineage4.3.4 | 2 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1 | 2 |
| La1.8.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 133 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20969708 | HR-TB | lineage2.2 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14782405 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR8692905 | HR-TB | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692887 | Other | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR8692882 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675234 | Other | None | ERR181887 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675510 | Other | None | SRR3675456 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR4819051 | Other | lineage4 | None | ERR2693231 | Other | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR5341330 | HR-TB | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341456 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR6045450 | Other | lineage4.9 | None | SRR6045519 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045555 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046492 | Other | None | SRR6045010 | Other | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046210 | Other | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6045053 | Other | None | SRR6045233 | HR-TB | None | SRR6045399 | Other | None | SRR6046299 | HR-TB | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR6046644 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283025 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR363453 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR387051 | HR-TB | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3797081 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4769452 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6359045 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866410 | Sensitive | None | ERR9787030 | Sensitive | lineage6 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR10809074 | Sensitive | lineage4 | None |
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