Rv0486 - c.561A>G
Drug resistance types
12 Sensitive
1 RR-TB
135 HR-TB
14 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
86 Other
lineage Counts
| lineage | Count |
|---|---|
| 165 | |
| lineage4.4.1.1 | 2 |
| lineage4.9 | 13 |
| lineage4 | 20 |
| lineage2.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.5 | 2 |
| lineage2.1 | 3 |
| lineage4.4.2 | 4 |
| lineage3 | 3 |
| lineage2.2 | 4 |
| lineage2 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.8 | 2 |
| La1.8.1 | 1 |
| lineage4.1;lineage1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1.2.1 | 7 |
| lineage4.1.2 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.2.1 | 1 |
| lineage4.3.4.1;La1.7 | 1 |
| La1 | 2 |
| lineage4.1.3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage6.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 252 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1169194 | Other | None | SRR1172728 | MDR-TB | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1175074 | MDR-TB | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1184294 | HR-TB | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196566 | HR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1710057 | Other | lineage2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR1640750 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR21726734 | Sensitive | lineage4.4.2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR21277755 | Sensitive | lineage4.5 | None | ERR176793 | Other | lineage4.1.1 | None | ERR4815604 | HR-TB | None | SRR21732384 | HR-TB | lineage4.4.2 | None | SRR27450488 | HR-TB | lineage4.4.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675488 | HR-TB | None | SRR3675465 | HR-TB | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675222 | Other | None | SRR3416776 | Other | lineage2.1 | None | SRR3675221 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | SRR3675311 | Other | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675555 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212034 | HR-TB | None | ERR4815752 | Other | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR2229542 | Other | lineage4.8 | None | ERR4816999 | Other | None | SRR3675545 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | ERR4817060 | RR-TB | None | ERR4816466 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212123 | Other | None | SRR3675572 | Other | None | ERR234659 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR4816656 | HR-TB | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | ERR4817893 | Other | lineage4.8;La3 | None | SRR7496472 | Other | None | ERR1035162 | Other | None | SRR5341418 | Other | None | ERR4818615 | Other | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341456 | Other | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818394 | Other | lineage4.9 | None | ERR4818929 | HR-TB | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR1035138 | MDR-TB | None | SRR5341432 | HR-TB | lineage4 | None | ERR2514692 | Other | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341302 | HR-TB | None | SRR5341313 | HR-TB | None | ERR2693231 | Other | None | SRR5341333 | HR-TB | None | SRR5341330 | HR-TB | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341315 | Sensitive | None | SRR6045503 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6044790 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045399 | Other | None | SRR6046305 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | ERR4830353 | Other | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | SRR6325447 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831117 | HR-TB | None | SRR6325442 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR502532 | HR-TB | None | SRR6785268 | Sensitive | lineage4.2.1 | None | SRR6789626 | Other | None | ERR294266 | HR-TB | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496517 | Other | None | SRR7496509 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR323108 | HR-TB | lineage4 | None | SRR7535086 | Other | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR323043 | HR-TB | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR1063858 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR3283031 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797010 | Sensitive | lineage4.9 | None | ERR3797014 | Other | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797048 | HR-TB | None | ERR3797061 | Other | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797071 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797087 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR4188350 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4407463 | HR-TB | None | ERR5336148 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR473332 | Other | lineage4 | None | ERR4769521 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811105 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811142 | MDR-TB | None | ERR4811493 | HR-TB | None | ERR736839 | Other | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR702406 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR736874 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR736867 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786604 | Other | None | ERR9119669 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | ERR990545 | Other | lineage3 | None |
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