Rv3596c - c.2355C>G


Drug resistance types
23 Sensitive 6 RR-TB 52 HR-TB 11 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 59 Other
lineage Counts
lineage Count
La1.7;lineage4.9 8
La1.7 1
lineage1;lineage4.9 1
lineage4.9 64
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1;lineage4.9 1
La1.7.1;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.1.1.3 2
La3;lineage4.9 5
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4.4.1.2 1
La1;lineage4.1.2 1
lineage4.9;lineage7 1
M.canetti;lineage4.9 4
lineage2.2 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.2.1.1 4
La1.2.BCG 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.6;lineage4 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 1
lineage4.3.4 1
lineage4.3.4.2.1 2
La2;lineage2.2 1
M.canetti;lineage4.2;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.3 2
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.6.3;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.6.4;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7;lineage4.9;lineage7 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1 6
lineage4 1
lineage4.3.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage3.1;lineage9 1
La1.7.1 1
spoligotype Counts
spoligotype Count
None 154
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4830353 Other La1.7 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR161037 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR176779 HR-TB lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
ERR323037 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1063849 HR-TB lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR5341308 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR29050859 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
ERR3283018 HR-TB lineage4.9 None
SRR29097066 Sensitive lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR6045233 Other M.canetti;lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR212033 Other lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR1063858 HR-TB lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR502511 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4820773 HR-TB lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR11465665 Other lineage4.1.1.3 None
ERR4819051 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR176751 Other lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR212001 HR-TB None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR6866807 Other lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR323115 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR5341461 HR-TB lineage4.9 None
SRR1181328 Other lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
SRR1181091 Other lineage2.2.1.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR736834 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1183144 Other lineage2.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR323066 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SAMN02585910 Other lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR323107 Sensitive lineage4.9 None