lineage | Count |
---|---|
77 | |
La1 | 1 |
lineage4 | 4 |
lineage1.2.2.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.9 | 7 |
lineage2.2.1 | 4 |
lineage2.2.1.1 | 1 |
lineage3.1 | 1 |
lineage2 | 1 |
lineage4.5 | 1 |
lineage4.3 | 1 |
lineage2.2 | 1 |
lineage4.8 | 1 |
lineage4.7 | 1 |
La2 | 1 |
spoligotype | Count |
---|---|
None | 104 |
ID | Drug resistance | Lineage | Country iso2 | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR387051 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4811022 | HR-TB | None | ERR5336148 | Other | None | ERR4811493 | HR-TB | None | ERR736839 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736874 | HR-TB | None | ERR736867 | HR-TB | None | ERR7821210 | Sensitive | lineage1.2.2.1 | None | SRR1172728 | MDR-TB | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1172234 | Other | None | ERR9119669 | HR-TB | None | ERR9786604 | Other | None | SRR1172857 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1173629 | Other | None | SRR1173400 | Other | None | SRR1172951 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196566 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR15368973 | Other | None | SRR19304036 | HR-TB | None | SRR19303884 | HR-TB | None | ERR4815604 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675236 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4816999 | Other | None | ERR212001 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675574 | HR-TB | None | SRR5341333 | HR-TB | None | ERR234659 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR2229666 | Sensitive | lineage4.8 | None | SRR5341302 | HR-TB | None | ERR2693230 | Other | None | ERR2693231 | Other | None | ERR2693254 | Other | None | SRR5535933 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2693257 | Other | None | SRR6044890 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046305 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6046046 | Other | None | ERR2693232 | Other | lineage4.9 | None | ERR323043 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046397 | Other | None | SRR6046540 | HR-TB | None | SRR8217918 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR7535086 | Other | None | SRR6046644 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | SRR7496509 | Other | None | ERR1034652 | Other | None | ERR3283032 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283024 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None |
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