EBG00000313339 - n.2432T>C


Drug resistance types
24 Sensitive 5 RR-TB 159 HR-TB 27 MDR-TB 15 Pre-XDR-TB 0 XDR-TB 166 Other
lineage Counts
lineage Count
162
lineage3 11
lineage4.8 13
lineage2.2.1 25
lineage4.1.2.1 24
lineage4.7 1
lineage4.9 39
lineage4.3.3 11
lineage4.1.2 1
lineage4 14
lineage4.6.2.2 5
lineage2.2 6
lineage1.1 1
lineage4.6.4 2
lineage4.3.2 2
La2 1
lineage3.1 4
lineage4.3.4.2.1 2
lineage4.1.2.1;lineage2.2.1 1
La1.8.1 5
lineage6.1.1 2
lineage4.1.3 2
lineage4.4.1.1 5
lineage1.2.2.2 1
La1 1
lineage4.8;La3 2
lineage2 3
lineage1.1.2 2
lineage3.1.2 1
lineage4.6.1.1 2
La1.2 1
lineage4.6.1.2 1
lineage4.1.2.1.1 1
lineage4.3.2.1 1
lineage4.8;lineage4.1 2
lineage6.3.1 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage2.2.2 1
La3 1
lineage2.2.1.1 6
lineage1.2.1.2 1
lineage4.5 2
lineage4.3.4.1 2
lineage1.1.1 2
lineage1.2.1.2.1 1
lineage3.1.3 1
lineage4.2.2.2 2
lineage9;lineage3.1 1
lineage2.2.1;La3 1
lineage4.1.1.1 1
lineage6.3;lineage2.2.1 1
lineage4;lineage3;lineage2.2.1 1
lineage4.1 1
lineage4.9;La3 1
lineage6.3;lineage4.9;lineage2.1 1
lineage4.2;La1.7 1
lineage4.9;lineage4.6.3 1
lineage3;lineage2.2.1 1
lineage4.1.1 2
lineage3;lineage2.1 1
lineage4.3 1
lineage4.1.1.3 1
lineage4;lineage1.1.2 1
lineage4;lineage2 1
spoligotype Counts
spoligotype Count
None 396
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341418 Other None
ERR4819546 HR-TB lineage3 None
ERR2514327 HR-TB lineage4.8 None
ERR2514821 Other lineage2.2.1 None
SAMN02414850 Other lineage4.1.2.1 None
ERR2514692 Other None
SRR5341302 HR-TB None
ERR4819932 Other lineage4.7 None
ERR278594 HR-TB None
SRR5341332 Pre-XDR-TB lineage3 None
SRR5341333 HR-TB None
ERR2446563 Other lineage2.2.1 nl
ERR2446570 Sensitive lineage4.8 nl
SRR5341470 HR-TB None
ERR4821143 RR-TB lineage4.9 None
ERR2693231 Other None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
ERR2693230 Other None
ERR2693254 Other None
SRR6045526 HR-TB None
ERR2693257 Other None
SRR6325442 HR-TB None
SRR6045519 HR-TB None
SRR6046133 HR-TB None
ERR2693232 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6046197 Other lineage4.3.3 None
SRR6045233 HR-TB None
SRR6045332 Other lineage4.9 None
SRR6046066 HR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6046225 HR-TB None
SRR6045555 HR-TB None
SRR6044790 HR-TB None
SRR6044838 Other lineage4.9 None
SRR6045327 HR-TB None
SRR6046362 HR-TB None
ERR1213875 Sensitive lineage4.3.3 de
SRR6046376 Other lineage3 None
SRR6046397 Other None
SRR6325444 HR-TB None
ERR1213913 Sensitive lineage4.1.2 de
SRR6046460 HR-TB None
SRR6325448 HR-TB None
SRR6046482 HR-TB None
SRR6046514 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046540 HR-TB None
SRR6046644 HR-TB None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6325447 HR-TB None
SRR6046839 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6831950 Other lineage4.3.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR3077978 Other lineage1.1 None
ERR4872102 MDR-TB lineage4.6.4 None
ERR294248 HR-TB None
SRR6785227 Other lineage2.2.1 None
SRR6832249 Other lineage2.2.1 None
SRR7496517 Other None
SRR6789626 Other None
SRR6832787 RR-TB lineage2.2.1 None
ERR294266 HR-TB None
ERR3132168 MDR-TB lineage4.3.2 None
ERR502524 HR-TB La2 None
ERR502532 HR-TB None
ERR5311099 HR-TB None
ERR5311090 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR7496509 Other None
ERR323034 HR-TB lineage3.1 None
ERR323036 HR-TB None
ERR502889 Other None
ERR5311081 HR-TB None
SRR7535086 Other None
ERR323038 HR-TB None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR7585435 Other lineage4.9 None
ERR323041 HR-TB None
ERR323039 HR-TB None
ERR323043 HR-TB None
ERR3797016 HR-TB None
ERR323055 HR-TB None
ERR323053 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR11488822 Pre-XDR-TB lineage4.1.2.1;lineage2.2.1 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1035157 Other lineage4.9 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR133986 HR-TB None
ERR12015086 Other lineage4.8 None
ERR3283017 HR-TB None
ERR3283024 Other None
ERR3283027 HR-TB None
ERR3283032 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3468544 HR-TB None
ERR067681 HR-TB None
ERR067712 HR-TB lineage4 None
ERR1034652 Other None
ERR12015084 Other lineage4.8 None
ERR3283036 HR-TB None
ERR3439432 Other None
ERR3797023 HR-TB La1.8.1 None
ERR3797014 Other None
ERR3797017 Other None
ERR3797043 HR-TB None
ERR3797044 Other None
ERR3797036 HR-TB None
ERR4188350 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3797061 Other None
ERR3797069 Other None
ERR3797083 HR-TB None
ERR3799304 Other lineage6.1.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR400529 Other lineage3 None
ERR403298 HR-TB lineage4 None
ERR3797082 Other lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR4407463 HR-TB None
ERR4407452 Sensitive lineage3 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4798262 HR-TB La1 None
ERR4798504 Other lineage3 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4800341 Other lineage3 None
ERR12015083 Other lineage4.8;La3 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4798139 Sensitive lineage1.1.2 None
ERR4798406 HR-TB None
ERR4798648 HR-TB lineage3.1.2 None
ERR4798823 HR-TB lineage4 None
ERR4810741 HR-TB None
ERR4811105 HR-TB None
ERR4811022 HR-TB None
ERR4811142 MDR-TB None
ERR5336148 Other None
ERR736835 HR-TB None
ERR5908228 Other lineage4.3.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR6358837 HR-TB None
ERR6358991 HR-TB None
ERR6359045 HR-TB None
ERR702406 HR-TB None
ERR5908124 Other lineage4.8 None
ERR5917710 Other lineage4.1.2.1 None
ERR6198317 Other La1.2 None
ERR702404 HR-TB None
ERR736839 Other None
ERR736865 HR-TB None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9117709 HR-TB None
ERR9119120 Other lineage4.8 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR8976043 HR-TB None
ERR9119096 Other lineage4.3.3 None
ERR9119508 MDR-TB lineage4.6.4 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786569 Other lineage4.8 None
ERR9786604 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786843 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9787014 Other lineage6.1.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR987722 HR-TB None
ERR9891991 Other lineage4.3.3 None
ERR987733 RR-TB lineage4.6.1.1 None
ERR9896144 Other lineage3 None
ERR9901120 Other lineage4.3.3 None
ERR9896151 Other lineage4.3.3 None
SRR1167055 Other lineage4.1.2.1 None
ERR990545 Other lineage3 None
SRR11462861 Other La1.8.1 None
SRR1162740 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR069981 HR-TB lineage2.2.2 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1167384 Other lineage4 None
SRR1169249 Other La3 None
SRR1169194 Other None
SRR1172310 HR-TB None
SRR1169306 Other None
SRR1172146 Sensitive lineage4.9 None
SRR1172214 HR-TB lineage4.9 None
SRR1172234 Other None
SRR1172817 HR-TB None
SRR1172728 MDR-TB None
SRR1172857 MDR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1173118 Other None
SRR1172951 Other None
SRR1173153 HR-TB None
SRR1173166 Other lineage4.9 None
SRR1173363 HR-TB None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173384 Other lineage4 None
SRR1173400 Other None
SRR1173453 Other lineage4.4.1.1 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1173484 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173788 Other None
SRR1173778 Other None
SRR1174897 HR-TB None
SRR1175049 RR-TB None
SRR12142341 HR-TB None
SRR1175074 MDR-TB None
SRR1175090 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR1181251 Other lineage2.2.1 None
SRR1181289 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1183144 Other lineage2.2.1 None
SRR1183145 Other lineage2.2.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR1184294 HR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1196494 MDR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR12006550 Other lineage1.2.1.2 None
SRR1165584 Other lineage4.1.2.1 None
SRR1180137 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180270 Other lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR1181328 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1196474 HR-TB lineage3.1 None
SRR1196546 HR-TB None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR12416824 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR13423649 Sensitive lineage2.2.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13837916 Sensitive lineage4.9 None
SRR13837526 Sensitive lineage4.9 None
SRR13837642 RR-TB lineage4.9 None
SRR13861163 Sensitive lineage4.9 None
SRR13861288 Other lineage4.9 None
SRR13861329 Other lineage4.9 None
SRR13861305 Other lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861528 HR-TB lineage4.9 None
SRR17832802 HR-TB lineage3 None
SRR13861646 Other lineage4.9 None
SRR13861663 Sensitive lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR15600376 HR-TB lineage2.2.1.1 None
SRR1640750 HR-TB None
SRR1510066 Other lineage1.2.1.2.1 None
SRR15368973 Other None
SRR1791696 Other La1.8.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18003019 Other lineage2.2.1 None
SRR18003031 HR-TB lineage2.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR18910194 HR-TB lineage2.2 None
SRR18913742 Sensitive lineage3.1.3 None
SRR19304036 HR-TB None
SRR25827771 Pre-XDR-TB lineage4.2.2.2 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR25827682 Other None
SRR19303884 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR22424787 Sensitive lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR26159048 HR-TB lineage4.9 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
ERR11081257 Other lineage4.8 None
ERR11081258 Other lineage4.8 None
SRR3675465 HR-TB None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR28119823 Sensitive lineage4.9 None
SRR25827605 Pre-XDR-TB lineage4;lineage3;lineage2.2.1 None
SRR3675464 HR-TB lineage4.1 None
ERR1035297 MDR-TB lineage4.3.4.1 br
ERR1035294 MDR-TB lineage4.1.2.1 br
SRR26159063 Sensitive lineage4.9 None
SRR26399973 Other lineage4.9;La3 None
SRR26159043 Other lineage4.9 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR23961559 Other lineage4.2;La1.7 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
SRR6325445 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR1035239 HR-TB None
SAMN02585910 Other lineage2.2.1 None
ERR158583 HR-TB None
ERR4815310 Other None
SRR3675482 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR161033 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675486 HR-TB None
SRR3675488 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675221 HR-TB None
ERR4814639 HR-TB lineage4 None
SRR3675222 Other None
SRR3675550 Other None
SRR3675232 Other lineage4.1.2.1 None
ERR176643 HR-TB None
SRR3675311 Other None
ERR4815550 Other lineage4 None
SRR3675312 HR-TB lineage4 None
ERR176740 HR-TB None
ERR4815752 Other lineage4.9 None
ERR176751 HR-TB None
SRR3675509 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR212001 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675383 HR-TB None
SRR3675502 Other None
ERR2229542 Other lineage4.8 None
ERR4816999 Other None
ERR212033 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816271 Sensitive lineage4.9 None
SRR3675558 HR-TB None
SRR3675572 Other None
SRR3675574 HR-TB None
ERR212121 HR-TB None
ERR4816466 HR-TB None
SRR3675571 HR-TB None
SRR3742665 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4817893 Other lineage4.8;La3 None
ERR4816656 HR-TB None
ERR4817667 HR-TB lineage4.8 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4816585 Other lineage2.2 None
ERR4816762 Other lineage4;lineage2 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR4815815 Sensitive lineage4 None
ERR234659 HR-TB None
ERR4817896 HR-TB lineage2.2.1 None
SRR7496472 Other None
ERR4818021 Other La1.8.1 None
ERR1035162 Other None
ERR3275196 Other lineage2.2.1 nl
ERR2229143 Other lineage4.1.1 None
ERR4820854 Other lineage4.1.2.1 None
ERR4818387 Sensitive lineage4.1.2.1 None
ERR4818929 HR-TB None
ERR2513470 Other lineage4.2.2.2 None
ERR4818561 HR-TB lineage4 None
ERR3275201 Sensitive lineage4.8 nl