Rv0668 - c.1482C>T
Drug resistance types
16 Sensitive
0 RR-TB
17 HR-TB
3 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 2 |
| lineage4.9 | 18 |
| lineage4.3.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage1.2.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.6.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 55 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20969434 | Sensitive | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR25515179 | Sensitive | lineage2.2.1 | None | ERR4798099 | Other | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR3273109 | HR-TB | lineage4 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR9786597 | Other | lineage4.6.2.2 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None |
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