EBG00000313339 - n.2378G>A


Drug resistance types
11 Sensitive 4 RR-TB 24 HR-TB 8 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 37 Other
lineage Counts
lineage Count
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.2.1 11
lineage4.9 17
lineage4.2.2.2 1
M.canetti;lineage4.2 1
La1.7;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 1
lineage3.1;lineage9 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.6.1.2 1
La1.6;La3;lineage4.9 2
La1.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage3 3
lineage4.3.2.1 1
lineage2.2.1.1 4
La3;lineage4.9 2
lineage6.1.3 1
lineage2.2.1;lineage4.1.2.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage1.1.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 2
lineage4.8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.6.2.2 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.2.BCG 1
lineage4.3.4.2 1
lineage4.6.3;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 91
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1180172 Other lineage2.2.1 None
SRR28119843 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR25827771 Pre-XDR-TB lineage4.2.2.2 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR10808730 Other lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4816322 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR28119823 Sensitive lineage4.9 None
ERR4827699 MDR-TB lineage2.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4769495 Other La1.3 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4814976 Other lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR4769493 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR28119827 Other La3;lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR6832249 Sensitive lineage2.2.1 None
ERR4769419 Sensitive lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1183144 Other lineage2.2.1 None
ERR3283018 HR-TB lineage4.9 None
SRR1183145 Other lineage2.2.1 None
SRR1180270 Other lineage2.2.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675502 Sensitive lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR4820290 Other lineage3 None
ERR2514327 HR-TB lineage4.8 None
SAMN02585910 Other lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR1181251 Other lineage2.2.1 None
ERR108125 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4816852 Other lineage4.9 None
SRR26159063 RR-TB lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR4800527 MDR-TB lineage2.2.1 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR26159048 HR-TB lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR2503533 Other lineage4.1.2.1 fi
ERR3283042 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR181744 HR-TB La3;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None