TB-Profiler
Home
Upload
SRA data
EBG00000313339
- n.2378G>A
Drug resistance types
10 Sensitive
4 RR-TB
24 HR-TB
8 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
35 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
16
lineage2.2.1
9
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
lineage2.2.1.1
4
lineage3
3
lineage4.6.2.2
2
La1.7;lineage4.9
2
lineage4.1.2.1
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
La3;lineage4.9
2
Showing 1 to 10 of 51 entries
Previous
1
2
3
4
5
6
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
88
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1034902
Pre-XDR-TB
lineage4.3.4.2
pt
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR108125
RR-TB
lineage4.9
None
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR11488822
Pre-XDR-TB
lineage2.2.1;lineage4.1.2.1
None
ERR133986
Other
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
None
ERR158583
MDR-TB
La3;M.canetti;lineage2;lineage4.2;lineage4.3
None
ERR161039
HR-TB
La3;lineage4.3.4
None
Showing 1 to 10 of 88 entries
Previous
1
2
3
4
5
…
9
Next