EBG00000313339 - n.2378G>A
Drug resistance types
13 Sensitive
1 RR-TB
31 HR-TB
3 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4 | 1 |
| 40 | |
| lineage4.9 | 14 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1 | 13 |
| lineage3 | 3 |
| lineage4.8 | 3 |
| lineage4.1.2.1 | 2 |
| lineage4 | 3 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.6.2.2 | 2 |
| La1.3 | 1 |
| lineage4.9;La1.3 | 1 |
| La1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.1.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage1.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675502 | Other | None | SRR3675234 | Other | None | ERR4814976 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | ERR4818458 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | None | ERR4816852 | Other | lineage4.9 | None | ERR1035162 | Other | None | ERR4816466 | HR-TB | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR4827699 | MDR-TB | lineage2.2.1 | None | SRR5007164 | Sensitive | lineage2.2.1 | None | ERR4820290 | Other | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR5341418 | Other | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR2693231 | Other | None | ERR2693257 | Other | None | ERR2693232 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046397 | Other | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR6046594 | HR-TB | lineage4 | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR502889 | Other | None | ERR502532 | HR-TB | None | ERR3283024 | Other | None | ERR1034652 | Other | None | ERR133986 | HR-TB | None | SRR8217918 | HR-TB | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR067681 | HR-TB | None | ERR10796634 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3439432 | Other | None | ERR3283058 | Other | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3797061 | Other | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR3797014 | Other | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR4769419 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR403298 | HR-TB | lineage4 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR736835 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6359045 | HR-TB | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR25827771 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR17658565 | Other | lineage3 | None | SRR22175263 | Pre-XDR-TB | lineage4.8 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR26159048 | HR-TB | lineage4.9 | None | SRR22536486 | MDR-TB | lineage4.3.3 | None | SRR22528580 | Sensitive | lineage4.1.1 | None | SRR23086707 | Pre-XDR-TB | lineage4.8 | None | SRR26159063 | Sensitive | lineage4.9 | None | SRR28119823 | Sensitive | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR158583 | HR-TB | None | ERR4814298 | Sensitive | lineage4.3.3 | None | SAMN02585910 | Other | lineage2.2.1 | None |
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