Rv1173 - c.2376A>T


Drug resistance types
0 Sensitive 8 RR-TB 40 HR-TB 13 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 75 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9 13
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.9 27
lineage2.1 3
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 11
10
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1 3
lineage3.1;lineage9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 1
M.canetti;lineage2.1;lineage4 1
lineage2.1;lineage4.9;lineage6.3 7
lineage4.1.2.1 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1;lineage3 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.9;lineage9 1
lineage4.9;lineage6.3 8
M.canetti;lineage2.1;lineage6.3 1
La3;lineage4.9 5
La1.2.BCG 1
La1.7;M.canetti;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La3;lineage2 1
lineage2.2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage3 2
lineage2.1;lineage6.3 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage5.2 2
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.2.BCG;La1.8.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage4.9 1
lineage2.1;lineage4.3.2 1
La3;lineage1.1.2 1
M.canetti;lineage2.2 1
lineage4 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.1.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
spoligotype Counts
spoligotype Count
None 140
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176751 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR7496472 Other lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR212001 HR-TB None
ERR212033 Other lineage4.9 None
ERR9787197 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR13861426 Other lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3275196 Other lineage2.2.1 nl
SRR13837970 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR13837597 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR6046133 HR-TB lineage4.9 None
SRR13837968 Other lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR13837708 Other lineage4.9 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR176643 Other La3;lineage4.9 None
ERR702406 Other lineage2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
SRR13837595 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR13837596 Other lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR13837967 Other lineage4.9 None
ERR9786843 Other None
SRR1184381 MDR-TB None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
SRR28119805 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR3797069 Other lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR13837975 Other lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR13837864 Other lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR4800341 Other lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR13861427 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR3797070 Other lineage4.9 None
SRR13861214 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
SRR25827682 Other None
ERR234659 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR6045555 Other lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR13861255 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR13837484 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4821053 RR-TB lineage3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2027263 Other lineage4 None
SRR26159043 Other lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
ERR2229143 RR-TB lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4872094 MDR-TB lineage5.2 None
SRR28119777 Other lineage4.9 None