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SRA data
Rv3596c
- c.-283G>A
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
2 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
4 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.1.1.1
1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
1
La3;lineage2.1;lineage4.9
1
1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
1
La3;M.canetti;lineage2.1;lineage4.9
1
lineage3.1;lineage9
1
M.canetti;lineage2.1;lineage4.9
1
La3;M.canetti;lineage2.2.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
9
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR124651
MDR-TB
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR126608
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR176793
Other
lineage4.1.1.1
None
ERR234659
Other
None
SRR25827418
XDR-TB
lineage3.1;lineage9
None
SRR3742657
Pre-XDR-TB
La3;M.canetti;lineage2.2.1
None
SRR5341302
Other
La3;lineage2.1;lineage4.9
None
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