Rv0407 - c.291C>T
Drug resistance types
14 Sensitive
1 RR-TB
15 HR-TB
7 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2 | 7 |
| lineage4.9 | 15 |
| lineage4.3.4 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La2;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.9;lineage7 | 3 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage3.1;lineage9 | 1 |
| La2;lineage2.2 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage3.1.2.1 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 41 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6280330 | Sensitive | lineage4.2.2 | cn | SRR6280130 | Sensitive | lineage4.2.2 | cn | SRR6280128 | Sensitive | lineage4.2.2 | cn | SRR21279447 | Sensitive | lineage4.2.2 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4811494 | HR-TB | lineage4.2.2 | cn | ERR736817 | HR-TB | lineage4.3.4 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR2179828 | Sensitive | lineage4.2.2 | cn | ERR4797184 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR13261169 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR752202 | Sensitive | lineage4.2.2 | th | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None |
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