Rv0006 - c.348C>T
Drug resistance types
5 Sensitive
6 RR-TB
24 HR-TB
15 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 12 |
| lineage2.1;lineage4.9 | 3 |
| La1.8.1 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| M.canetti;lineage2.1;lineage4.9 | 17 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1 | 1 |
| La1.7.1 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| lineage4.1.1.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage3.1;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13861224 | Sensitive | lineage4.9 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR3797083 | RR-TB | lineage4.9 | None | ERR2693228 | RR-TB | lineage4.9 | None | SRR13861381 | HR-TB | lineage4.9 | None | ERR3468544 | Other | lineage2.1;lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR13861266 | Sensitive | lineage4.9 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR6797425 | Sensitive | lineage1.1.3.1 | None | ERR5311098 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675515 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4188350 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | SRR6044815 | Other | lineage4.9 | None | SRR7240492 | HR-TB | La1.7.1 | None | ERR3468607 | Other | lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR2514662 | Sensitive | lineage4.1.1.3 | gb | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675487 | Other | M.canetti;lineage4.9 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3797023 | HR-TB | La1.8.1 | None | SRR13861510 | Other | lineage4.9 | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None |
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