Rv0006 - c.2082T>C


Drug resistance types
78 Sensitive 3 RR-TB 148 HR-TB 14 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 101 Other
lineage Counts
lineage Count
157
lineage4.3.2 2
lineage4.3.3 3
lineage4.3.4.2 1
lineage4.1.2.1 4
lineage4.6.2.2 2
lineage6.3.1 1
lineage6.1.3 1
lineage2.2.2 2
lineage3.1.2.2;lineage3.1.2.1 1
lineage3 4
lineage4 61
lineage2.2.1 15
La3 1
lineage4.9 42
lineage2.2.1.1 2
lineage4.9;lineage2.2 1
lineage2.2 6
lineage4.4.1.1.1 1
lineage1.2.1.2 1
La1.7.1 1
lineage4.5 3
lineage4.1 3
lineage9;lineage3.1 1
lineage4.9;lineage4.6.3 1
lineage4.1.1.3 2
lineage4.3.4.2.1 2
lineage4.3.4 1
lineage3;lineage2.1 1
lineage2.1 1
lineage4.3 1
lineage4.8 2
La1.8.1 3
lineage4.1.1 1
lineage4.1.1.2 1
lineage5.1.4 1
lineage4.9;lineage2.1 1
lineage1.1 1
lineage3.1 2
lineage4.3.4.1 1
La2 1
lineage4.1.2 2
lineage4.3.2.1 1
La1 2
lineage4;lineage3.1 1
La1.2 1
lineage3.1.2 1
lineage4.6.1.1 1
lineage4.1.2.1.1 1
spoligotype Counts
spoligotype Count
None 349
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR8976043 HR-TB None
ERR9119669 HR-TB None
ERR9117709 HR-TB None
ERR9117805 Other lineage4.3.2 None
ERR9119096 Other lineage4.3.3 None
ERR9786843 Other None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9787139 Other lineage6.3.1 None
ERR9787256 Other lineage6.1.3 None
ERR987722 HR-TB None
SRR069981 HR-TB lineage2.2.2 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR990545 Other lineage3 None
SRR1158918 Sensitive lineage4 None
SRR10315567 Other lineage2.2.1 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1167384 Other lineage4 None
SRR1172310 HR-TB None
SRR1169306 Other None
SRR1169249 Other La3 None
SRR1175500 MDR-TB lineage4 None
SRR1174897 HR-TB None
SRR1175506 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR1180148 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180399 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR1180413 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1183049 Other lineage2.2 None
SRR1181289 Other lineage2.2.1 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
SRR1183965 Sensitive lineage4.9 None
SRR1183106 Other lineage2.2.1.1 None
SRR1640750 HR-TB None
SRR13861163 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR18213713 HR-TB lineage4.5 None
SRR3675502 Other None
SRR12708416 Sensitive lineage4.1 None
ERR4815604 HR-TB None
SRR19303884 HR-TB None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR3675464 HR-TB lineage4.1 None
SRR3675477 Other lineage4.9 None
SRR3675482 HR-TB None
SRR6325445 HR-TB None
ERR158583 HR-TB None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3675465 HR-TB None
ERR1035239 HR-TB None
ERR161033 HR-TB None
SRR3675486 HR-TB None
SRR3675488 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
ERR161039 Sensitive lineage4.3.4 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR181744 HR-TB None
SRR3675221 HR-TB None
SRR3675501 HR-TB None
SRR3675229 Other lineage4 None
SRR3675246 Sensitive lineage4 None
SRR3675236 HR-TB None
SRR3675234 Other None
ERR702405 Sensitive lineage2.1 None
SRR3675284 HR-TB lineage4.9 None
SRR3675280 HR-TB lineage4.9 None
SRR3675279 Other None
SRR3675247 Other lineage4.9 None
ERR176568 Other lineage4.3 None
SRR3675311 Other None
ERR176643 HR-TB None
SRR3675383 HR-TB None
SRR3675387 Sensitive None
SRR3675456 HR-TB None
SRR3675455 Sensitive lineage4 None
ERR176751 HR-TB None
SRR3675510 Other None
SRR3675541 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR3675522 Other None
SRR3675545 HR-TB None
SRR3675547 Other lineage4.9 None
SRR3675558 HR-TB None
SRR3675550 Other None
ERR212033 HR-TB None
SRR3675555 HR-TB None
ERR212001 HR-TB None
ERR212034 HR-TB None
ERR4816656 HR-TB None
ERR212121 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816585 Other lineage2.2 None
ERR212123 Other None
ERR212138 HR-TB lineage4 None
SRR3675571 HR-TB None
ERR4817896 HR-TB lineage2.2.1 None
ERR2229702 Other lineage4.8 None
ERR4818929 HR-TB None
ERR4818021 Other La1.8.1 None
ERR1035162 Other None
ERR2229143 Other lineage4.1.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR2446566 Other lineage4.1 None
ERR4818252 Other lineage4.1.1.2 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4818536 Other lineage4.9 None
SRR5341387 Other lineage4 None
SRR5341396 Other lineage4 None
SRR5341456 Other None
ERR2513283 Other lineage5.1.4 None
ERR4818615 Other None
ERR4819462 Other lineage4 None
ERR1035138 MDR-TB None
SRR5341418 Other None
SRR5341323 Sensitive lineage4 None
SRR5341437 Sensitive lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR5341299 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
ERR4819781 Other lineage2.2.1 None
SRR5341300 Other lineage4 None
ERR1023509 Other None
SRR5341461 Sensitive lineage4 None
ERR4820854 Other lineage4.1.2.1 None
SRR5341330 HR-TB None
SRR5341345 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341366 Sensitive lineage4 None
SRR5341467 Other lineage4 None
ERR2693238 HR-TB lineage4.9 None
SRR5341469 Other lineage4 None
ERR2693231 Other None
SRR5341470 HR-TB None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
SRR6046141 Other lineage4.9 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2693230 Other None
ERR4821655 Sensitive lineage4 None
ERR2693254 Other None
ERR2693257 Other None
SRR6045519 HR-TB None
ERR278594 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6044855 Other lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR6044838 Other lineage4.9 None
SRR6045217 Other lineage4 None
SRR6045952 HR-TB None
SRR6045002 MDR-TB lineage4.9 None
SRR6045053 Other None
SRR6045233 HR-TB None
SRR6046397 Other None
SRR6046066 HR-TB None
SRR6045399 Other None
SRR6046259 Sensitive lineage4.9 None
SRR6046299 HR-TB None
SRR6325444 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046362 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046540 HR-TB None
SRR6046460 HR-TB None
SRR6046482 HR-TB None
SRR6046514 HR-TB None
ERR4830353 Other None
SRR6046492 Other None
SRR6325448 HR-TB None
SRR6046824 HR-TB None
SRR6046644 HR-TB None
SRR6325447 HR-TB None
ERR4831546 HR-TB lineage2.2 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6325442 HR-TB None
ERR3077978 Other lineage1.1 None
ERR323034 HR-TB lineage3.1 None
SRR6511621 HR-TB None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR6832787 RR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR294248 HR-TB None
ERR294266 HR-TB None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR323036 HR-TB None
ERR502524 HR-TB La2 None
ERR502510 Sensitive lineage4 None
ERR5311099 HR-TB None
ERR502889 Other None
SRR9970979 Sensitive lineage4.8 None
ERR5311081 HR-TB None
ERR323038 HR-TB None
SRR7496509 Other None
SRR7535082 Sensitive lineage4 None
ERR5311090 HR-TB None
SRR9970980 Other lineage4.1.2 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323054 HR-TB lineage3.1 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR323041 HR-TB None
ERR323055 HR-TB None
ERR323053 HR-TB None
SRR9971112 Other lineage2.2.1 None
ERR323039 HR-TB None
ERR323066 Sensitive lineage4 None
ERR323063 HR-TB None
ERR067681 HR-TB None
ERR323107 Other lineage4 None
ERR323108 HR-TB lineage4 None
ERR323085 Sensitive lineage4 None
ERR067699 HR-TB lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1063839 HR-TB lineage2.2 None
ERR1023525 HR-TB lineage4 None
ERR1034652 Other None
ERR1035122 Sensitive None
ERR1063857 HR-TB None
ERR3283025 HR-TB None
ERR133825 Sensitive lineage4 None
ERR133986 HR-TB None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3283010 Other La1 None
ERR3283014 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR108471 HR-TB lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283017 HR-TB None
ERR3283021 HR-TB None
ERR3283028 Other None
ERR3439432 Other None
ERR3283024 Other None
ERR3283027 HR-TB None
ERR3283032 HR-TB None
ERR3283036 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283055 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 HR-TB None
ERR3283040 HR-TB None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3445504 HR-TB None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3468544 HR-TB None
ERR363456 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR363509 Sensitive lineage4 None
ERR3797047 HR-TB lineage4 None
ERR3797015 HR-TB None
ERR3797014 Other None
ERR3797017 Other None
ERR3797043 HR-TB None
ERR3797046 HR-TB None
ERR3797016 HR-TB None
ERR3797044 Other None
ERR3797060 Other La1.8.1 None
ERR3797048 HR-TB None
ERR3797073 HR-TB La1.8.1 None
ERR3797061 Other None
ERR3797069 Other None
ERR3797065 MDR-TB lineage4 None
ERR3797063 HR-TB None
ERR3797083 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3797086 Other lineage4.9 None
ERR400345 Other lineage4 None
ERR387051 HR-TB None
ERR400320 Sensitive lineage4 None
ERR4024991 Other None
ERR403298 HR-TB lineage4 None
ERR405209 Sensitive lineage4 None
ERR5336148 Other None
ERR4188350 HR-TB None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR473323 HR-TB lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR473332 Other lineage4 None
ERR4769521 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR4797474 Other None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4797588 MDR-TB lineage3 None
ERR4798406 HR-TB None
ERR4798262 HR-TB La1 None
ERR4798099 Other None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799378 Sensitive lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4811031 Sensitive lineage4.5 None
ERR4810624 HR-TB lineage2.2 None
ERR4811030 Sensitive None
ERR4812155 Sensitive None
ERR6358755 Other lineage4.6.1.1 None
ERR5908228 Other lineage4.3.3 None
ERR5987372 Pre-XDR-TB lineage2.2.2 None
ERR6358837 HR-TB None
ERR6358991 HR-TB None
ERR6358979 Other None
ERR6866022 Other None
ERR6866639 Other None
ERR6866547 Sensitive lineage4 None
ERR6866410 Sensitive None
ERR736835 HR-TB None
ERR702404 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR736834 Sensitive lineage4 None
ERR736837 Other lineage4.9 None
ERR736839 Other None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR736865 HR-TB None
ERR736867 HR-TB None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR751326 Sensitive lineage4 None
ERR752229 Other lineage4.5 None
ERR7821163 Other lineage2.2.1 None