Rv0668 - c.3828G>A


Drug resistance types
125 Sensitive 3 RR-TB 45 HR-TB 11 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 68 Other
lineage Counts
lineage Count
La1;lineage4.9 3
lineage4.9 152
La1;lineage4.1.2 1
lineage4.9;lineage7 2
La1.2.BCG 1
lineage5.1.4 1
La1.7;lineage4.9 5
lineage4 6
lineage2.2.1 12
lineage4.8;lineage4.9 2
lineage4.1.1.3;lineage4.9 2
lineage4.2.1 2
lineage3.1;lineage9 1
lineage3 2
La3;lineage4 1
2
La1.7.1 1
lineage4.1.2 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.1.2.1 3
lineage1.1.2 3
lineage6.1.3 1
La3;lineage4.9 8
lineage4.1;lineage4.9 2
La1.7;lineage3.1;lineage4 1
La1;lineage2;lineage4.9 1
lineage2.2.2 1
lineage4.3.4.2.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage3.1 1
lineage1.1.1;lineage4 1
lineage3.1.3 1
lineage4.6.2.2 1
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
lineage4.5 2
lineage4.1.1.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.3 2
M.canetti;lineage4.9;lineage9 1
La3;M.canetti;lineage4.9 1
La1.8.1 2
La2;lineage4.9 1
lineage1.2.1.1 1
lineage4.1.1.2 1
lineage4.3.2.1 1
lineage4.9;lineage9 1
lineage1.1.3.1 1
lineage4.4.1.2 1
lineage4.9.1 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage3;lineage4.9 1
lineage2.2.1;lineage4 1
lineage1;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7;lineage4.9;lineage6 1
lineage2.2 1
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.4.1.1 1
M.canetti;lineage1 1
spoligotype Counts
spoligotype Count
None 259
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR133825 HR-TB La1;lineage4.9 None
ERR363502 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR1034634 HR-TB lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR2513283 Sensitive lineage5.1.4 None
SRR5341456 Other lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR2517475 Other lineage4 None
ERR4797313 Sensitive lineage2.2.1 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR6045010 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR369162 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR28351347 Other lineage3 None
ERR3283028 Other La3;lineage4 None
ERR369163 Sensitive lineage4.9 None
ERR1063896 Sensitive None
SRR1159378 Other lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4178309 Other lineage4.1.2.1 None
SRR5341310 Other lineage1.1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR13285068 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR502510 Sensitive lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR363474 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR4769474 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446382 Other lineage4 None
ERR11465509 Sensitive lineage4.3.4.2.1 None
ERR4596910 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR926164 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR5341308 Sensitive lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR28351442 HR-TB lineage3.1 None
ERR363447 Other lineage4.9 None
ERR373947 Other lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR2513121 Sensitive lineage3.1.3 None
ERR473334 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341387 Other lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR926155 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR926157 Sensitive lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR752229 Other lineage4.5 None
ERR323066 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR6046611 Sensitive lineage4.9 None
ERR363453 Sensitive lineage4.9 None
DRR474204 Pre-XDR-TB lineage2.2.1 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR369158 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR6046863 Sensitive lineage1.1.2 None
ERR3797048 Other La3;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
SRR1175508 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR6865513 Other lineage4.1.2.1 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR363499 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4797193 HR-TB lineage1.1.2 None
ERR11466062 Sensitive lineage4.9.1 None
ERR779852 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR369157 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR12708416 Sensitive None
SRR5341396 Other lineage3;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR28351342 HR-TB lineage2.2.1;lineage4 None
SRR10808730 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR3675477 Sensitive lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR736872 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4810624 MDR-TB lineage2.2 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1175496 Sensitive lineage4.9 None
ERR3275450 Other lineage4 None
ERR369151 Other lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675580 Sensitive lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR12708384 Sensitive lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR6358979 Other lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR5341345 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR3675577 Sensitive lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR10808399 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR6866639 Other lineage4.9 None