lineage | Count |
---|---|
53 | |
lineage4 | 20 |
lineage2.2.1 | 4 |
lineage2.2 | 3 |
lineage4.1.2 | 1 |
lineage4.6.1.1 | 2 |
lineage4.9 | 9 |
lineage6.1.1 | 2 |
lineage4;lineage3.1 | 1 |
La1.2 | 1 |
lineage3.1.2 | 1 |
lineage1.2.2.2 | 1 |
lineage4.3.4 | 2 |
lineage6.1.3 | 1 |
La1.8.1 | 1 |
La1.7.1 | 1 |
lineage9;lineage3.1 | 1 |
lineage4.8 | 1 |
lineage3 | 2 |
spoligotype | Count |
---|---|
None | 107 |
ID | Drug resistance | Lineage | Country iso2 | SRR6045053 | Other | None | SRR6045010 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046299 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046397 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR8217918 | HR-TB | None | SRR6511621 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR502510 | Sensitive | lineage4 | None | ERR1063857 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3797063 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797064 | Sensitive | None | ERR405209 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4769457 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4769521 | HR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797264 | Sensitive | None | ERR6866022 | Other | None | ERR6358979 | Other | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | SRR1172310 | HR-TB | None | SRR10808805 | Sensitive | None | ERR9787256 | Other | lineage6.1.3 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1174897 | HR-TB | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR3675270 | HR-TB | None | SRR3675510 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675456 | HR-TB | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | SRR3675555 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4818929 | HR-TB | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR234659 | HR-TB | None | ERR1035138 | MDR-TB | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341456 | Other | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341470 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None |
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