Rv3596c - c.1668T>C


Drug resistance types
25 Sensitive 6 RR-TB 21 HR-TB 13 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 45 Other
lineage Counts
lineage Count
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage1.1.3.2 1
La1.7;lineage4.9;lineage7 3
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.9 35
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La2;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.4.2 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage3 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.7;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.1;lineage4.8 2
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage3.1;lineage9 1
lineage2.2 1
La1.7.1 1
lineage4.8 4
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.6;La3;lineage4.9 2
lineage4.6.2.2 2
lineage4.9;lineage9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.9;lineage7 1
lineage4.6.4;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage3.1.3 1
lineage2.2.1 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage6.1.3 1
La2;lineage2.2 1
lineage4.1.2.1 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
lineage6.1.2 1
lineage4.9;lineage6.3 1
M.canetti;lineage4.2 1
1
lineage4.7 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 112
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR7821126 Sensitive lineage1.1.3.2 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR20969542 Other lineage4.4.2 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR323037 Other lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1023509 Other lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6046485 Other lineage4.9 None
ERR736831 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4810624 MDR-TB lineage2.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR12015086 RR-TB lineage4.8 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR2446566 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR12015085 Other lineage4.8 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR6359069 Sensitive lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6044942 HR-TB lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR4815815 Sensitive lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR6045795 Sensitive lineage2.2.1 None
ERR6866807 Other lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9786384 Sensitive lineage4.1.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR7496471 Sensitive lineage4 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3797085 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4819546 HR-TB lineage3 None
SRR6046594 Sensitive lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4818110 Sensitive lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
ERR9786843 Other None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR4815471 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR12015084 Other lineage4.8 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None