EBG00000313339 - n.3022T>C


Drug resistance types
78 Sensitive 6 RR-TB 57 HR-TB 21 MDR-TB 5 Pre-XDR-TB 1 XDR-TB 61 Other
lineage Counts
lineage Count
M.canetti;lineage1 1
La3;lineage4.9 9
lineage4.9 114
lineage4.1.1.3 1
lineage2.2.1.1 4
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.2.1 1
lineage4.3.4.2.1 2
lineage1.1.3.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 1
lineage3.1 1
lineage2.2.1 11
lineage6.1.2 1
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage4.2 1
lineage3.1.3 1
La1.2.BCG 2
lineage4.8;lineage4.9 2
La1.7;lineage4.9 8
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage3.1;lineage9 1
lineage2.2 1
M.canetti;lineage4.9;lineage9 1
lineage5.2 2
La1.7.1 1
La1.7;lineage4.9;lineage7 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage4.9 2
lineage1;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage4.1.1.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
La1;lineage2;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage1.1.2 3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.9;lineage7 2
La1.8.1 4
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7;lineage4.9;lineage6 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
lineage4.3.3 1
La2;lineage2.2 1
lineage4.1.2 1
lineage4.1.2.1 1
La2;lineage4.9 1
lineage6.1.3 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.2.1 1
lineage4.9;lineage9 1
La1;lineage4.9 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4 1
La1.7.1;lineage4.9 1
La1;lineage4.1.2 1
lineage3.1.2.1 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage3 1
lineage2.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.3.4 1
La3;lineage4 1
1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.2;La1.8.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 229
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR15014655 Other M.canetti;lineage1 None
ERR3283011 Other La3;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR10808490 Sensitive lineage2.2.1.1 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR473332 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR28351442 HR-TB lineage3.1 None
SRR5341467 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR779852 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
SRR9971112 Other lineage2.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR2513121 Sensitive lineage3.1.3 None
SRR1915487 Other La1.2.BCG None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675502 Sensitive lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR137286 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR1159378 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR5341455 Sensitive lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769474 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR3675582 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1063849 HR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR5311094 HR-TB lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6045892 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR3797081 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR10808730 Other lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR926165 Sensitive lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR6866807 Other lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR926157 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3283040 HR-TB lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
ERR3797029 Other lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR387051 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR9970980 HR-TB lineage4.1.2 None
ERR6358979 Other lineage4.9 None
SRR9613550 HR-TB lineage4.1.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR6866410 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR5341300 HR-TB lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR9787256 Other lineage6.1.3 None
ERR181887 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR3797073 Other La1.8.1 None
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR1034634 HR-TB lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR1915485 Other La1.2.BCG None
ERR970413 MDR-TB lineage2.2.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR181824 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR176778 HR-TB lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4797474 Sensitive lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR970445 MDR-TB lineage2.2.1 None
ERR1063858 HR-TB lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR3283028 Other La3;lineage4 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1063896 Sensitive None
ERR502511 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR9119669 HR-TB lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR702405 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR3797019 Other La1.8.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4819051 Sensitive lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161037 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None