SRR3675214
|
Other
|
lineage4.9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
SRR1169194
|
Other
|
lineage4.9
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4819322
|
Other
|
lineage1.1;lineage4
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
SRR1173384
|
Other
|
lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6789626
|
Other
|
|
None
|
SRR15014682
|
MDR-TB
|
lineage4.8
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
ERR4816470
|
HR-TB
|
lineage3
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
SRR1196474
|
Other
|
lineage3.1.1
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR4815441
|
HR-TB
|
lineage4.9
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6044942
|
HR-TB
|
lineage4.9
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
ERR9117709
|
Other
|
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR502532
|
Other
|
M.canetti;lineage2.1;lineage6.3
|
None
|
SRR3675234
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR9786656
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
ERR502912
|
Other
|
lineage2.2.1
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
ERR234659
|
Other
|
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
SRR10808730
|
Other
|
lineage4.9
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675539
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6046382
|
Sensitive
|
lineage2.2.1
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
ERR9786986
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR25827418
|
XDR-TB
|
lineage3.1;lineage9
|
None
|
ERR11252736
|
Other
|
lineage4.9
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
ERR3283024
|
Other
|
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
ERR2693257
|
Other
|
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
|
None
|
ERR3797044
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
|
None
|
SRR29772570
|
Other
|
lineage4.9
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
ERR3797017
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2693231
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.9
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
ERR4816999
|
Other
|
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
SRR3675236
|
Other
|
|
None
|
ERR212121
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR990545
|
Other
|
lineage3
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR11465232
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR3675549
|
Other
|
lineage4.9
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR7496509
|
Other
|
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786843
|
Other
|
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR6046305
|
Sensitive
|
lineage4.9
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
ERR736875
|
HR-TB
|
lineage4.9
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
SRR1173363
|
Other
|
|
None
|
SRR3675457
|
Other
|
lineage4.9
|
None
|
SRR6045795
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4818615
|
Sensitive
|
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR29051093
|
Other
|
lineage4.9
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
SRR6785267
|
Other
|
lineage2.2.1
|
None
|
ERR4817893
|
Other
|
La3;lineage4.8
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
ERR387051
|
Other
|
lineage4.9
|
None
|
SRR1175074
|
Other
|
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4817735
|
Other
|
lineage4.8
|
None
|
SRR25827687
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
ERR2693245
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
SRR7496517
|
Other
|
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR3675231
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
SRR17658565
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
ERR4815604
|
Other
|
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
SRR6046066
|
Other
|
lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
ERR3283031
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR29051077
|
Other
|
lineage4.9
|
None
|
ERR216938
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
ERR3283020
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
SRR6046644
|
HR-TB
|
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
SRR7535086
|
Other
|
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
ERR2693230
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
ERR11081258
|
Other
|
lineage4.8
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
SRR8217918
|
HR-TB
|
lineage4.9
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
SRR1196571
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6044835
|
Other
|
lineage4.9
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
ERR6358991
|
HR-TB
|
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR3797014
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
SRR1173118
|
Other
|
lineage2.2.1
|
None
|
ERR2514692
|
Other
|
|
None
|
SRR25827682
|
Other
|
|
None
|
SRR1172857
|
Other
|
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR28351554
|
Sensitive
|
La1.6;lineage4
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR21732980
|
Other
|
lineage4.3.3
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR23961558
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
ERR4819241
|
Other
|
lineage4.9
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
SRR1173788
|
Sensitive
|
lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|