Rv3596c - c.225T>G


Drug resistance types
28 Sensitive 2 RR-TB 73 HR-TB 13 MDR-TB 6 Pre-XDR-TB 4 XDR-TB 161 Other
lineage Counts
lineage Count
lineage4.9 82
La3;lineage2.1;lineage4.9 2
lineage2.2.1 14
lineage4.3.3 3
lineage2.1;lineage6.3 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage1.1;lineage4 1
lineage2.1;lineage4.9 15
lineage2.1;lineage4.9;lineage6.3 10
lineage1;lineage4.9 1
24
lineage4.8 5
lineage3 6
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage4.9 9
lineage3.1.1 1
lineage4.1.2.1 10
La3 2
M.canetti;lineage2.1;lineage4.9 2
lineage2.1 5
M.canetti;lineage2.1;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.7;lineage4.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7;lineage4.9 4
lineage5.2 2
lineage2.2.2;lineage4 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage7 2
lineage4.1;lineage4.8 1
lineage4.7 2
lineage4.9;lineage6.3 9
lineage4 3
lineage1.1.1 1
La1.2.BCG;La1.8.1 1
lineage3.1;lineage9 1
lineage4.6.1.1 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage2.2.1 1
La3;lineage2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
lineage4.1.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.6.2.2 1
La1.2.BCG 2
La1;lineage4.9 1
M.canetti;lineage2.2 2
lineage2.1;lineage4.9;lineage7 1
La3;lineage2.1;lineage6.3 1
La3;lineage4.8 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
lineage1.1.2 1
La3;lineage1.1.2 1
M.canetti;lineage4.9 2
lineage2.2.1;lineage3 1
lineage2.2.2 1
M.canetti;lineage1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.1.1.1 2
lineage4.4.1.1 1
lineage3.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.1.1.3 1
lineage4.3.4.2.1 1
La1.7;M.canetti;lineage4.9 1
La1.6;lineage4 1
lineage6.1.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
lineage6.3.1 1
spoligotype Counts
spoligotype Count
None 287
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675214 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4188247 HR-TB lineage4.9 None
SRR1169194 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4819322 Other lineage1.1;lineage4 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1035157 Other lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR1173384 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR6789626 Other None
SRR15014682 MDR-TB lineage4.8 None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR926158 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR4769474 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283011 Other La3;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR1196474 Other lineage3.1.1 None
ERR4820854 Other lineage4.1.2.1 None
ERR4815441 HR-TB lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6044942 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR1172728 RR-TB La3 None
ERR971389 Sensitive lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR4819546 HR-TB lineage3 None
ERR1063849 HR-TB lineage4.9 None
ERR9117709 Other None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR176751 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675311 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1184381 MDR-TB None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4818536 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR176778 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR7496523 Other lineage4.7 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6046382 Sensitive lineage2.2.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4819314 Other lineage1.1.1 None
ERR926157 Sensitive lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR176651 Other lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR11252736 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR18213713 HR-TB None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR29772570 Other lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR4820773 HR-TB lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR736848 Other lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR181887 Other lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816999 Other None
ERR3797063 Sensitive La3;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR3675236 Other None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR990545 Other lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4819877 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4800341 Other lineage3 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR28119777 Other lineage4.9 None
ERR926164 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675549 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1915487 Other La1.2.BCG None
ERR4798262 HR-TB La1.2.BCG None
ERR3804155 Other lineage4.1.2.1 None
ERR9786843 Other None
SRR20632814 Sensitive lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR181824 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR6046305 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR1173363 Other None
SRR3675457 Other lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR4818615 Sensitive None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR29051093 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818929 HR-TB lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6785267 Other lineage2.2.1 None
ERR4817893 Other La3;lineage4.8 None
ERR736817 HR-TB lineage4.3.4 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR387051 Other lineage4.9 None
SRR1175074 Other None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR7496517 Other None
ERR3797048 Other La3;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR926162 Sensitive lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR4815604 Other None
ERR926160 Sensitive lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR18910194 HR-TB lineage2.2.2 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR161037 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR176779 HR-TB lineage4.9 None
SRR7535086 Other None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR1172234 Other lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1184346 HR-TB lineage3.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR212125 HR-TB lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
SRR1173118 Other lineage2.2.1 None
ERR2514692 Other None
SRR25827682 Other None
SRR1172857 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR4819462 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1184372 MDR-TB None
ERR9786604 Other None
SRR3675572 Other None
SRR28351554 Sensitive La1.6;lineage4 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR1173788 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None