Rv3596c - c.1815G>A


Drug resistance types
57 Sensitive 13 RR-TB 79 HR-TB 17 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 80 Other
lineage Counts
lineage Count
lineage4.9 129
M.canetti;lineage4.9 4
lineage4.7 1
lineage4.2;lineage4.9 2
2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.7;lineage4.9;lineage6 1
lineage4.5 1
La1.7;lineage4.9 6
lineage4.8 4
lineage2.2.1 17
lineage4.1.1.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.8.1 2
lineage4.1.2.1 5
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1;lineage2;lineage4.9 1
lineage4.8.1 1
lineage3 3
La3;lineage4.9 5
lineage4.9;lineage6.1.3 1
lineage4 5
lineage4.3.2.1 2
La1.7;M.canetti;lineage4.9 2
lineage1.2.2.1;lineage4.4.1.1 1
lineage4.6.2.2 3
lineage2.2.1.1 4
La1;lineage4.1.2 1
lineage4.9;lineage7 1
lineage3.1;lineage9 1
La1;lineage4.9 3
lineage3.1.3 1
lineage4.8;lineage4.9 2
lineage4.4.1.1.1 1
lineage4.1.1.3 2
lineage1.2.1.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
La1.7;lineage3.1;lineage4 1
lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1.2;lineage7 1
lineage1.1.2 3
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage1.1.3.1 1
La3;lineage2.1;lineage4.9 1
lineage3.1.2.1 1
lineage4.1.2 1
lineage4.3.3 1
La3;M.canetti;lineage4.9 1
lineage4.3.4.2.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage6.1.3 2
La1.3 1
lineage2;lineage4.9 1
lineage4.2.1 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.2.1;lineage4.9 2
lineage4.1;lineage4.9 1
La1.4 1
spoligotype Counts
spoligotype Count
None 250
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR6045503 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR8692905 Sensitive None
ERR1063896 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
ERR6359074 HR-TB lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
SRR20632814 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR369158 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR1791747 Other La1.8.1 None
ERR6866639 HR-TB lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR3275709 HR-TB lineage3 nl
ERR4769439 HR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR6046897 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR3675461 RR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR7236177 Other La1.8.1 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR26399255 Sensitive lineage2.2.1 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR4596910 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
ERR6358951 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4797184 HR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR373947 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR1180413 Sensitive lineage4.9 None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4769442 Sensitive lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR11252612 Other La3;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR349300 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR6045010 Sensitive lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR702405 HR-TB lineage4.9 None
SRR3675265 Other lineage4 None
SRR6046878 Other lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
ERR4814734 Other lineage1.2.1.1 None
SRR6044942 HR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341300 HR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR1181351 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR7496471 Sensitive lineage4 None
SRR5341461 HR-TB lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR3675585 HR-TB lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4814976 Other lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6045706 Other lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR6046863 Sensitive lineage1.1.2 None
SRR5341453 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR3283042 HR-TB lineage4.9 None
ERR363445 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR5341467 Other lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
SRR1238558 Other lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR363479 Other lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR3797080 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR6045053 Other lineage4 None
SRR6045795 Other lineage2.2.1 None
SRR1180406 Sensitive lineage4.9 None
ERR4797474 Other lineage4.9 None
SRR3675441 RR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR212033 Other lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR6866410 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4816322 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
SRR12142339 HR-TB lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR9787256 Other lineage6.1.3 None
ERR373946 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR4769514 Other La1.3 None
SRR5341310 Other lineage1.1.2 None
SRR14801749 HR-TB lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
SRR10315567 HR-TB lineage2.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR9971270 RR-TB lineage2.2.1 None
ERR323062 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR363498 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR751326 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR323037 Other lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR10808399 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR10809074 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR21677886 Sensitive lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR1023236 Other lineage6.1.3 None
SRR6045191 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR3283018 HR-TB lineage4.9 None