Rv3245c - c.-71G>A


Drug resistance types
51 Sensitive 1 RR-TB 44 HR-TB 17 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 31 Other
lineage Counts
lineage Count
lineage4.1.1.3;lineage4.9 1
lineage4.9 77
lineage3.1.2.1;lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.2.1;lineage4 1
lineage2.2.1 4
La3;lineage4.9 2
La1.7.1;La1.7.X-unk4 1
lineage4.9;lineage9 3
La2;lineage4.9;lineage9 1
lineage4 4
La1;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 1
M.canetti;lineage4.2 1
La1.2.BCG 1
2
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.2.1 1
lineage3.1;lineage9 1
lineage4.1;lineage4.9 1
lineage4.5 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
lineage4.3.4 1
M.canetti;lineage4.9;lineage9 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
La1.7;lineage4.9 3
La2;lineage4.9 1
lineage2.1;lineage4.9 1
La1;lineage2;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 1
lineage4.9;lineage6.3 2
lineage5.1.4 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage1;lineage4.9 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.1.2 1
M.canetti;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage3.1.2.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 147
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR363498 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR702405 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR363509 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR363447 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR987722 MDR-TB None
ERR736875 HR-TB lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045503 Sensitive lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR323062 Sensitive lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR1172310 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR502511 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR363499 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR373947 Other lineage4.9 None
ERR779852 Sensitive lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR373946 Sensitive lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR5341299 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR369163 Sensitive lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR3675279 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6046133 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4815441 HR-TB lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR751326 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR926164 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
SRR12708416 Sensitive None
DRR474203 Sensitive lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None