TB-Profiler
Home
Upload
SRA data
Rv3793
- c.1659T>C
Drug resistance types
20 Sensitive
11 RR-TB
52 HR-TB
28 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
116 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
26
22
lineage2.1;lineage4.9
19
M.canetti;lineage2.1;lineage4.9
18
lineage4.2.1.1
13
lineage2.1;lineage4.9;lineage6.3
9
lineage2.2.1
8
lineage4.1.2.1
8
M.canetti;lineage2.1;lineage4.9;lineage6.3
5
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
4
Showing 1 to 10 of 83 entries
Previous
1
2
3
4
5
…
9
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
230
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR11068198
Sensitive
lineage4.2.1.1
None
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR161033
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR161037
Other
lineage4.9
None
ERR176549
Other
lineage4.3.4.2.1
None
Showing 1 to 10 of 230 entries
Previous
1
2
3
4
5
…
23
Next