Rv0701 - c.-293G>C
Drug resistance types
19 Sensitive
5 RR-TB
81 HR-TB
20 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.1 | 3 |
| La1.4 | 1 |
| lineage4.9 | 103 |
| lineage3 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage1.1.3.1 | 1 |
| La1.6;lineage4 | 1 |
| La3;lineage4.9 | 6 |
| lineage2.2.1.2 | 1 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.9.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2 | 4 |
| La2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.1 | 5 |
| lineage4.9;lineage7 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| La1.7.1;lineage4.9 | 1 |
| La1.7 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7;lineage4.9 | 6 |
| lineage4 | 4 |
| lineage3.1;lineage9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| 1 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.2.BCG | 1 |
| M.canetti;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.8.1 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 189 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR16278274 | Other | La1.4 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6046594 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR28351554 | Other | La1.6;lineage4 | None | ERR3797029 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR245758 | Other | lineage4.9.1 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR926165 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | SRR6046593 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR4796254 | Other | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6046046 | Other | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6045555 | Other | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR181887 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR926160 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR4819241 | Other | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR971389 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR1063896 | HR-TB | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR4797474 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR11465604 | HR-TB | lineage4.8.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR6045548 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None |
|---|
