Rv0639 - c.285C>T
Drug resistance types
23 Sensitive
1 RR-TB
12 HR-TB
6 MDR-TB
1 Pre-XDR-TB
3 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 28 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage2.2.1 | 5 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4 | 4 |
| lineage3 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage2.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2.1 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.2.1 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.5 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 65 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675455 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR25827305 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR990545 | Other | lineage3 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR3675522 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR400326 | Other | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4812155 | Other | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR9786843 | Other | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR3275450 | Other | lineage4 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR9896144 | Other | lineage3 | None |
|---|
