Rv0006 - c.1086C>T
Drug resistance types
10 Sensitive
2 RR-TB
29 HR-TB
9 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| 45 | |
| lineage3.1 | 2 |
| lineage2.2.1 | 12 |
| lineage4 | 6 |
| lineage4.9 | 5 |
| lineage4.3.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage2 | 2 |
| lineage4.9;La3 | 1 |
| lineage4.1.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.8 | 2 |
| lineage4.8;La3 | 1 |
| lineage4.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 88 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR1172728 | MDR-TB | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173153 | HR-TB | None | SRR1173118 | Other | None | SRR1172951 | Other | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1175049 | RR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1173384 | Other | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173658 | Sensitive | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184372 | MDR-TB | None | SRR1196494 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR11972366 | Sensitive | lineage2.2.1 | None | SRR1196546 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR20969572 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR12882733 | Sensitive | lineage1.2.2.2 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR20969553 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368973 | Other | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR20969664 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR21277082 | Sensitive | lineage2.2.1 | None | SRR3675501 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR176793 | Other | lineage4.1.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | SRR3742665 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4816151 | Other | lineage4.8 | None | ERR4817060 | RR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817735 | Other | lineage4.8 | None | ERR4818394 | Other | lineage4.9 | None | ERR752215 | Sensitive | lineage2.2.1 | th | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | DRR185085 | Sensitive | lineage1.1.1 | vn | SRR5341302 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR4830353 | Other | None | ERR4810973 | MDR-TB | lineage2.2.1 | cn | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4811129 | Sensitive | lineage2.2.1 | cn | SRR6789626 | Other | None | ERR4407463 | HR-TB | None | ERR349296 | Sensitive | lineage4 | None | ERR1034652 | Other | None | ERR4407452 | Sensitive | lineage3 | None | ERR736874 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736856 | HR-TB | lineage4 | None |
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