Rv3854c - c.1005T>C


Drug resistance types
3 Sensitive 1 RR-TB 0 HR-TB 8 MDR-TB 0 Pre-XDR-TB 1 XDR-TB 4 Other
lineage Counts
lineage Count
La1.7;M.canetti;lineage4.9 2
lineage1.2.1.2.1 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage3.1;lineage9 1
M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
spoligotype Counts
spoligotype Count
None 17
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR9125711 Sensitive lineage1.2.1.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4827915 Sensitive lineage2.2.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR16058177 Sensitive lineage1.2.1.2.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None