Rv0006 - c.2118T>C
Drug resistance types
37 Sensitive
2 RR-TB
139 HR-TB
4 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 48 |
| 133 | |
| lineage4.8 | 1 |
| lineage4.9 | 11 |
| lineage3 | 1 |
| lineage2.2.1 | 6 |
| lineage4.9;lineage2.1 | 1 |
| La2 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2 | 3 |
| La1.2 | 2 |
| lineage1.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4 | 2 |
| lineage4.5 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| La1.7.1 | 1 |
| lineage2 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.1 | 1 |
| lineage2.1 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 223 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR212125 | HR-TB | lineage4 | None | SRR3675545 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4819051 | Other | lineage4 | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | ERR1035162 | Other | None | SRR5341387 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818929 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341456 | Other | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341418 | Other | None | ERR1035138 | MDR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR1023509 | Other | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341333 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR6045526 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044838 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341467 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045503 | HR-TB | None | SRR6045519 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045952 | HR-TB | None | SRR6045053 | Other | None | SRR6045010 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045399 | Other | None | SRR6046362 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | ERR4830353 | Other | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046460 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | SRR6325442 | HR-TB | None | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR323036 | HR-TB | None | ERR502889 | Other | None | ERR502524 | HR-TB | La2 | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323045 | HR-TB | None | SRR8217918 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323041 | HR-TB | None | ERR323039 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323063 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR3273109 | MDR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3439432 | Other | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR403298 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR473332 | Other | lineage4 | None | ERR4188247 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769421 | Other | La1.2 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR2514636 | Sensitive | lineage1.1.2 | gb | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4797474 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798406 | HR-TB | None | ERR4812155 | Sensitive | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR6358837 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6358991 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | SRR10808399 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR9786843 | Other | None | SRR1062876 | Sensitive | lineage4.9 | None | ERR8976043 | HR-TB | None | ERR987722 | HR-TB | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR1172817 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR1640750 | HR-TB | None | SRR14801749 | Sensitive | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR25827682 | Other | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | ERR161033 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675501 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | ERR181887 | HR-TB | None |
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