EBG00000313325 - n.906A>G


Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
0 Sensitive 2 RR-TB 17 HR-TB 186 MDR-TB 96 Pre-XDR-TB 19 XDR-TB 9 Other
lineage Counts
lineage Count
lineage3 54
lineage1.2.2.1 1
lineage4.6.1.2 5
lineage4.3.4.1 3
lineage4.1.2.1 52
lineage4.1.4 12
lineage4.1.1 5
lineage4.8 13
lineage4.9 2
lineage1.1.3.1 5
lineage3.1.1 12
lineage2.2.2 47
lineage3.1.2 10
lineage3.1.2.1 3
lineage1.2.2.2 5
lineage3.1 8
lineage2.2.1 11
lineage4.5 9
lineage4.4.1.1 4
lineage4 4
lineage3.1;lineage9 1
lineage1.2.1.2.1 5
lineage3;lineage4.8 1
lineage3.1.1;lineage4.6.3 2
lineage6.1.1 3
lineage4.2.1.1 1
lineage1.1.2 2
lineage4.4.2 3
lineage4.2.2.2 8
lineage1.2.1.2 2
lineage2.2;lineage4.1.2.1 1
lineage1.1.1.1 1
lineage2.2.1;lineage4.8 2
lineage4.3.4.2 2
lineage2.2 1
lineage4.6.2.2 2
lineage2.2.1.2 2
lineage4.6.2 2
lineage4.6.1.1 3
lineage4.3.4.2.1 7
lineage2.2.1;lineage3 4
lineage4.6.5 2
lineage4.3.1 1
lineage4.4.1.1.1 3
lineage4.4 1
lineage2.2.1.1;lineage3 1
lineage3;lineage4.3.4.2 1
spoligotype Counts
spoligotype Count
None 329
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2510602 MDR-TB lineage3 None
SRR28045485 MDR-TB lineage1.2.2.1 None
ERR1034887 MDR-TB lineage4.6.1.2 pt
ERR11775998 MDR-TB lineage4.3.4.1 None
ERR4811993 MDR-TB lineage4.1.2.1 pe
ERR9119488 MDR-TB lineage4.1.4 None
SRR29017245 Pre-XDR-TB lineage3 None
ERR13260440 HR-TB lineage4.1.1 None
ERR4799702 MDR-TB lineage3 in
ERR11082129 MDR-TB lineage4.8 None
ERR13284212 MDR-TB lineage4.9 None
SRR29017628 MDR-TB lineage1.1.3.1 None
SAMN02403540 MDR-TB lineage3.1.1 za
ERR4872082 MDR-TB lineage4.1.4 None
ERR13296461 MDR-TB lineage2.2.2 None
SRR29093357 Pre-XDR-TB lineage2.2.2 None
ERR270753 Pre-XDR-TB lineage3.1.2 None
DRR130176 Pre-XDR-TB lineage2.2.2 None
SRR28394107 MDR-TB lineage4.1.2.1 None
SRR28393567 MDR-TB lineage4.1.2.1 None
SRR28045393 Pre-XDR-TB lineage3.1.2.1 None
SRR1167370 MDR-TB lineage3.1.1 None
SRR28351527 Pre-XDR-TB lineage1.2.2.2 None
SRR28045564 Pre-XDR-TB lineage3.1 None
ERR1034589 Pre-XDR-TB lineage3.1 pk
ERR1034591 Pre-XDR-TB lineage3.1 pk
ERR1034604 Pre-XDR-TB lineage3 pk
ERR5918009 XDR-TB lineage2.2.2 za
SRR1165624 MDR-TB lineage3.1.1 None
SRR4423146 Pre-XDR-TB lineage2.2.2 None
ERR108511 MDR-TB lineage2.2.1 ru
SRR6824328 MDR-TB lineage4.5 cn
SRR6824332 MDR-TB lineage4.5 cn
SRR6824373 MDR-TB lineage4.5 cn
SRR18149473 Other lineage4.4.1.1 None
SRR11662128 MDR-TB lineage2.2.1 None
ERR4872101 MDR-TB lineage4.1.4 None
SRR29051513 MDR-TB lineage4.1.2.1 None
ERR13292509 Pre-XDR-TB lineage2.2.2 None
ERR688021 Pre-XDR-TB lineage3.1 None
SRR17657976 Other lineage4 None
SRR29017122 MDR-TB lineage2.2.2 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR270739 Pre-XDR-TB lineage3.1.2 None
ERR12118038 MDR-TB lineage4.1.2.1 None
SRR21576706 Pre-XDR-TB lineage2.2.2 None
ERR9992954 XDR-TB lineage2.2.2 None
SRR16058174 MDR-TB lineage4.5 None
SRR10040222 MDR-TB lineage1.2.1.2.1 None
ERR4872219 MDR-TB lineage4.1.4 None
ERR4797591 MDR-TB lineage3 in
ERR11080965 MDR-TB lineage4.8 None
ERR9992890 MDR-TB lineage4.4.1.1 None
SRR13870398 Pre-XDR-TB lineage4.1.2.1 None
SRR25827506 MDR-TB lineage3;lineage4.8 None
ERR4800710 MDR-TB lineage3 None
ERR11243563 Other lineage2.2.1 None
ERR11069028 MDR-TB lineage4.1.2.1 None
SAMEA5569520 Pre-XDR-TB lineage4.1.2.1 None
ERR9119586 MDR-TB lineage4.1.4 None
SRR5486887 MDR-TB lineage4.1.2.1 None
ERR4011933 MDR-TB lineage3.1.1;lineage4.6.3 None
SRR1577820 MDR-TB lineage6.1.1 None
SRR29539617 HR-TB lineage4.2.1.1 None
ERR13260672 Pre-XDR-TB lineage4.1.2.1 None
ERR11082090 MDR-TB lineage3 None
ERR9119530 MDR-TB lineage4.1.4 None
ERR987747 MDR-TB lineage3 None
ERR4872124 MDR-TB lineage4.1.4 None
SRR28858382 MDR-TB lineage1.1.2 None
ERR4813711 MDR-TB lineage4.1.2.1 None
ERR7737664 MDR-TB lineage2.2.2 None
SRR29772623 Pre-XDR-TB lineage3.1.2 None
ERR4553877 MDR-TB lineage2.2.2 None
ERR6358759 MDR-TB lineage4.6.1.2 None
SRR1169227 RR-TB lineage3.1.1 None
SRR6930929 HR-TB lineage2.2.2 None
SRR29094403 MDR-TB lineage4.4.1.1 None
ERR9119507 MDR-TB lineage4.1.4 None
SRR5217423 HR-TB lineage2.2.1 None
ERR11081546 Pre-XDR-TB lineage4.1.2.1 None
ERR13291046 MDR-TB lineage4.4.2 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4827592 MDR-TB lineage2.2.1 None
ERR13290991 Pre-XDR-TB lineage2.2.2 None
ERR4423474 Pre-XDR-TB lineage2.2.2 None
SRR29274041 MDR-TB lineage4.1.2.1 None
ERR8774247 Pre-XDR-TB lineage2.2.2 None
SRR29093679 MDR-TB lineage4.2.2.2 None
SRR1577834 MDR-TB lineage6.1.1 None
ERR270752 Pre-XDR-TB lineage3.1.2 None
SRR28858467 HR-TB lineage1.2.1.2 None
ERR11049157 Other lineage3 None
SRR29016902 MDR-TB lineage1.2.2.2 None
ERR2516442 MDR-TB lineage2.2;lineage4.1.2.1 None
ERR4553607 HR-TB lineage1.1.3.1 None
SRR29017197 Pre-XDR-TB lineage3 None
SRR4423147 Pre-XDR-TB lineage3 None
ERR4872128 MDR-TB lineage4.6.1.2 None
ERR13260858 MDR-TB lineage4.4.1.1 None
SRR25827499 Pre-XDR-TB lineage3 None
SRR28240124 HR-TB lineage4 None
ERR11043680 MDR-TB lineage3 None
ERR7737643 MDR-TB lineage1.1.1.1 None
ERR9119613 MDR-TB lineage4.1.4 None
SRR29017386 MDR-TB lineage1.2.2.2 None
SRR25827753 XDR-TB lineage3 None
ERR13273281 HR-TB lineage2.2.1;lineage4.8 None
SRR29440611 MDR-TB lineage1.2.1.2.1 None
ERR11082575 MDR-TB lineage2.2.2 None
SRR29017453 MDR-TB lineage1.2.2.2 None
ERR7975647 MDR-TB lineage4.1.2.1 None
SRR6964603 MDR-TB lineage3 None
SRR28646076 MDR-TB lineage4.1.2.1 None
SRR8380892 MDR-TB lineage4.2.2.2 in
SRR29017179 Pre-XDR-TB lineage3 None
ERR7975635 Pre-XDR-TB lineage4.1.2.1 None
ERR9120023 Pre-XDR-TB lineage2.2.2 None
ERR13290836 Pre-XDR-TB lineage2.2.2 None
ERR13261609 HR-TB lineage4.1.1 None
ERR11082542 MDR-TB lineage4.3.4.2 None
ERR4553659 MDR-TB lineage2.2 None
ERR13249495 MDR-TB lineage4.5 None
ERR4553527 MDR-TB lineage1.2.2.2 None
ERR7737817 MDR-TB lineage4.2.2.2 None
SRR28393744 HR-TB lineage4.1.2.1 None
SRR29274033 Pre-XDR-TB lineage4.1.2.1 None
ERR9119584 MDR-TB lineage4.6.2.2 None
ERR4813607 Pre-XDR-TB lineage4.1.1 None
ERR13266816 MDR-TB lineage3.1.2 None
ERR13284994 Pre-XDR-TB lineage2.2.1.2 None
SRR29017680 MDR-TB lineage3.1 None
ERR9119534 MDR-TB lineage4.6.1.2 None
SRR1167374 MDR-TB lineage3.1.1 None
SRR1169214 MDR-TB lineage3.1.1 None
SRR29289370 XDR-TB lineage3 None
SRR29289402 Pre-XDR-TB lineage4.6.2 None
ERR5987405 Pre-XDR-TB lineage2.2.2 None
SRR13870402 Pre-XDR-TB lineage4.1.2.1 None
ERR13284782 MDR-TB lineage4.8 None
ERR13290726 Pre-XDR-TB lineage2.2.2 None
ERR2510505 MDR-TB lineage3 pk
SRR18593215 Pre-XDR-TB lineage4.8 None
ERR13285146 MDR-TB lineage3 None
SRR20969453 MDR-TB lineage4.4.2 None
SRR29289322 XDR-TB lineage3 None
SRR29289371 MDR-TB lineage3 None
SRR29289416 XDR-TB lineage3 None
ERR6358710 MDR-TB lineage4.6.1.1 None
ERR15686453 Pre-XDR-TB lineage3 None
ERR13290990 Pre-XDR-TB lineage2.2.2 None
SRR29017152 Pre-XDR-TB lineage2.2.2 None
ERR4799533 MDR-TB lineage3 None
ERR7737741 MDR-TB lineage3.1.1 None
ERR4798517 MDR-TB lineage3.1 in
SRR29231806 MDR-TB lineage4.3.4.2.1 None
ERR11067245 HR-TB lineage3 None
ERR4796714 MDR-TB lineage3 in
SRR21576666 MDR-TB lineage4.4.2 None
SRR7655978 Other lineage4.9 None
ERR270686 Pre-XDR-TB lineage3.1.2 None
SAMN02403539 MDR-TB lineage3.1.1 za
SRR11662416 MDR-TB lineage3 None
SRR29017439 MDR-TB lineage2.2.2 None
ERR4813629 MDR-TB lineage4.1.2.1 None
ERR13284980 MDR-TB lineage2.2.2 None
SRR29231847 MDR-TB lineage4.3.4.2.1 None
ERR13191093 MDR-TB lineage2.2.2 None
ERR11043731 MDR-TB lineage4.1.2.1 None
ERR3287349 MDR-TB lineage4.1.2.1 pe
SRR28351578 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR3287809 MDR-TB lineage4.1.2.1 pe
ERR2707222 MDR-TB lineage4.3.4.2.1 cd
ERR7911476 MDR-TB lineage2.2.2 vn
ERR2707113 MDR-TB lineage4.3.4.2.1 cd
ERR4813038 MDR-TB lineage4.1.2.1 pe
ERR11069009 RR-TB lineage4.8 None
DRR130114 Pre-XDR-TB lineage2.2.1 None
ERR2120265 MDR-TB lineage4.6.5 None
SRR6785477 HR-TB lineage2.2.1 None
SRR13180331 Pre-XDR-TB lineage4.3.1 None
ERR10680180 MDR-TB lineage4.8 None
SRR3082076 MDR-TB lineage4.6.5 None
SRR25827512 MDR-TB lineage3 None
SRR3105748 MDR-TB lineage3 None
SRR3082080 MDR-TB lineage4.2.2.2 None
SRR25827848 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR4872120 MDR-TB lineage4.1.4 None
ERR4831434 Pre-XDR-TB lineage3 None
SRR5486881 Pre-XDR-TB lineage4.1.2.1 None
SRR25827462 XDR-TB lineage3 None
ERR12117989 MDR-TB lineage4.1.2.1 None
SRR21887709 Pre-XDR-TB lineage2.2.2 None
ERR1213862 Other lineage4 kr
ERR9125714 MDR-TB lineage4.5 None
ERR4553872 MDR-TB lineage2.2.2 None
SRR5535835 MDR-TB lineage4.3.4.2.1 None
ERR10748549 Pre-XDR-TB lineage2.2.2 None
ERR4872188 MDR-TB lineage4.1.4 None
SRR833102 MDR-TB lineage4.4.1.1.1 None
ERR4872186 MDR-TB lineage4.6.2.2 None
ERR11044093 Other lineage3 None
ERR13290935 Pre-XDR-TB lineage2.2.2 None
ERR2179659 MDR-TB lineage4.5 None
SRR25827513 XDR-TB lineage2.2.1;lineage3 None
SRR28044944 XDR-TB lineage4.2.2.2 None
SRR1577831 MDR-TB lineage6.1.1 None
ERR13290871 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR13284858 MDR-TB lineage4.1.2.1 None
ERR13267015 XDR-TB lineage2.2.1 None
ERR13243574 MDR-TB lineage2.2.1 None
SRR29772772 Pre-XDR-TB lineage3.1.2 None
ERR13291134 Pre-XDR-TB lineage2.2.2 None
ERR2653184 MDR-TB lineage4.3.4.1 None
ERR11069059 Pre-XDR-TB lineage2.2.1.2 None
SRR1165657 MDR-TB lineage3.1.1 None
SRR29274038 MDR-TB lineage4.1.2.1 None
ERR13285052 MDR-TB lineage4.8 None
ERR7737942 MDR-TB lineage4.2.2.2 None
ERR11081858 MDR-TB lineage4.8 None
SRR18213857 Pre-XDR-TB lineage3.1.2 None
ERR6358864 MDR-TB lineage4.6.1.1 None
ERR3287327 Pre-XDR-TB lineage4.1.2.1 None
ERR2653079 MDR-TB lineage4.3.4.1 None
ERR13285048 MDR-TB lineage4.8 None
ERR11044645 MDR-TB lineage3 None
SRR7585421 MDR-TB lineage4.4 None
ERR3132096 Other lineage4 None
SRR25827599 Pre-XDR-TB lineage3 None
SRR1169295 MDR-TB lineage3.1.1 None
ERR13290833 Pre-XDR-TB lineage2.2.2 None
SAMN02053794 MDR-TB lineage4.4.1.1.1 za
ERR3335727 MDR-TB lineage3 pk
ERR13290872 MDR-TB lineage3 None
SRR29289238 Pre-XDR-TB lineage4.6.2 None
ERR13249493 MDR-TB lineage4.5 None
ERR4831525 Pre-XDR-TB lineage3 pk
ERR4829970 MDR-TB lineage3 pk
SRR29289178 XDR-TB lineage3 None
SRR29289305 Pre-XDR-TB lineage3 None
SRR29289110 XDR-TB lineage3 None
ERR3148194 MDR-TB lineage1.2.1.2 mx
ERR4798672 HR-TB lineage1.1.2 in
ERR9120022 Pre-XDR-TB lineage2.2.2 None
ERR4799965 Pre-XDR-TB lineage3.1 in
ERR13261049 XDR-TB lineage3 None
ERR13260559 MDR-TB lineage4.1.2.1 None
ERR4800413 MDR-TB lineage3 in
ERR4800367 Pre-XDR-TB lineage2.2.1;lineage4.8 in
ERR4813154 XDR-TB lineage4.1.2.1 None
SRR6152767 HR-TB lineage1.2.1.2.1 ca
ERR4813388 MDR-TB lineage4.1.2.1 pe
ERR4812643 HR-TB lineage4.1.2.1 None
ERR4813323 MDR-TB lineage4.1.2.1 None
ERR4830813 MDR-TB lineage4.2.2.2 et
SRR28393411 Pre-XDR-TB lineage4.1.2.1 None
ERR2510546 Pre-XDR-TB lineage3.1.2.1 None
SRR10040514 MDR-TB lineage4.5 None
SRR13583428 MDR-TB lineage4.1.2.1 None
ERR2677470 MDR-TB lineage4.3.4.2 de
ERR2517095 MDR-TB lineage3.1.2 gb
ERR2516820 MDR-TB lineage3.1.2 gb
SRR22536492 MDR-TB lineage4.8 None
SRR29096312 MDR-TB lineage3.1.1;lineage4.6.3 None
ERR13261574 MDR-TB lineage4.1.2.1 None
SRR29772718 MDR-TB lineage1.1.3.1 None
ERR13258429 Pre-XDR-TB lineage2.2.1 None
ERR5987260 Pre-XDR-TB lineage2.2.2 None
SRR21576619 Pre-XDR-TB lineage2.2.2 None
SRR25827850 XDR-TB lineage2.2.1.1;lineage3 None
SRR28394114 MDR-TB lineage4.1.2.1 None
ERR3273132 Pre-XDR-TB lineage2.2.2 None
ERR9992760 XDR-TB lineage2.2.2 None
SRR10525360 MDR-TB lineage4.1.2.1 None
ERR2517371 MDR-TB lineage3.1.1 nl
SRR25827381 Pre-XDR-TB lineage3;lineage4.3.4.2 None
ERR6358743 Pre-XDR-TB lineage4.6.1.2 None
SRR3085334 MDR-TB lineage4.2.2.2 None
ERR4797178 Pre-XDR-TB lineage3 in
ERR688036 Pre-XDR-TB lineage3 None
ERR3287859 MDR-TB lineage4.1.1 pe
SRR8698508 MDR-TB lineage4.1.1 None
ERR12118040 MDR-TB lineage4.1.2.1 None
SRR22137380 Pre-XDR-TB lineage3 None
ERR3256109 Other lineage1.2.1.2.1 ph
ERR11081799 MDR-TB lineage4.8 None
SRR5486899 MDR-TB lineage4.1.2.1 None
ERR6358867 MDR-TB lineage4.6.1.1 None
SRR25827688 Pre-XDR-TB lineage3 None
ERR13291116 Pre-XDR-TB lineage2.2.2 None
ERR13290816 Pre-XDR-TB lineage2.2.2 None
SRR4423153 Pre-XDR-TB lineage2.2.2 None
ERR11044294 MDR-TB lineage1.2.1.2.1 None
ERR4553541 HR-TB lineage1.1.3.1 None
ERR688023 Pre-XDR-TB lineage3.1 None
SRR21576691 Pre-XDR-TB lineage2.2.2 None
ERR13276425 Pre-XDR-TB lineage4.1.2.1 None
SRR21576716 Pre-XDR-TB lineage2.2.2 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR12117947 MDR-TB lineage4.1.2.1 None
SRR4423139 Pre-XDR-TB lineage2.2.2 None
ERR4423751 MDR-TB lineage4.3.4.2.1 None
ERR13290978 Pre-XDR-TB lineage2.2.2 None
ERR9119526 MDR-TB lineage4.1.4 None
DRR130164 Pre-XDR-TB lineage2.2.1 None
ERR4821961 Pre-XDR-TB lineage3 None
SRR29273764 MDR-TB lineage4.1.2.1 None
ERR13266820 XDR-TB lineage3 None
SRR13583408 MDR-TB lineage4.1.2.1 None
ERR9029863 Pre-XDR-TB lineage4.1.2.1 None
SRR29096357 MDR-TB lineage3.1.1 None
SRR29016835 MDR-TB lineage3.1.2.1 None
ERR13292508 Pre-XDR-TB lineage2.2.2 None
SRR28046185 Pre-XDR-TB lineage3 None
ERR13285049 MDR-TB lineage4.8 None
ERR12117988 MDR-TB lineage4.1.2.1 None
SRR833044 MDR-TB lineage4.4.1.1.1 None
ERR7975633 Pre-XDR-TB lineage4.1.2.1 None
ERR11081797 MDR-TB lineage4.8 None
SRR29056028 MDR-TB lineage4.1.2.1 None
ERR4423752 MDR-TB lineage4.3.4.2.1 None
ERR13291001 Pre-XDR-TB lineage2.2.2 None
ERR4796503 XDR-TB lineage3 in
SRR29017176 MDR-TB lineage2.2.2 None
ERR4798290 Pre-XDR-TB lineage3 in
ERR4798750 Pre-XDR-TB lineage3 in
SRR29358143 HR-TB lineage4.1.2.1 None
SRR29017071 MDR-TB lineage1.1.3.1 None
ERR4799691 MDR-TB lineage3 in