EBG00000313325 - n.906A>G


Drug resistance types
0 Sensitive 2 RR-TB 17 HR-TB 169 MDR-TB 86 Pre-XDR-TB 2 XDR-TB 14 Other
lineage Counts
lineage Count
lineage3.1.1 12
lineage4.1.2.1 41
lineage2.2.1 17
lineage4.4.1.1.1 3
lineage4.3.1 1
lineage6.1.1 3
lineage3 53
lineage4.4.2 2
lineage4.5 9
lineage3.1.2 10
lineage4.4.1.1 3
lineage4.8 10
lineage2.2.2 23
lineage2.2.1.2 1
lineage4.3.4.2 2
12
lineage4.6.5 2
lineage4.2.2.2 9
lineage4.9.1 1
lineage4.1.1 3
lineage1.2.1.2.1 5
lineage3.1.2.1 1
lineage4.6.2 1
lineage4.2.1;lineage2.2.1 1
lineage4.1.2.1;lineage2.2 1
lineage2.2 6
lineage4.3.4.1 2
lineage4.3.4.2.1 5
lineage4.9 3
lineage1.2.1.2 1
lineage4.1.4 12
lineage4.6.2.2 3
lineage4.6.1.2 5
lineage3;lineage1.1.2 2
lineage1.1.2 2
lineage4 2
lineage4.4 1
lineage3.1 6
lineage4.3.3 2
La1.8.1 1
lineage4.6.3;lineage3.1.1 1
lineage1.2.2.2 3
lineage1.1.3.1 1
lineage3;lineage2.2.1 1
lineage4.8;lineage2.2.1 1
lineage4.6.1.1 3
lineage1.1.1.1 1
spoligotype Counts
spoligotype Count
None 290
Geographic prevalence
Country level data for this variant is available for 101 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1165657 MDR-TB lineage3.1.1 None
SRR10525360 MDR-TB lineage4.1.2.1 None
SRR1167370 MDR-TB lineage3.1.1 None
SRR1169265 MDR-TB lineage3.1.1 None
SRR1169227 MDR-TB lineage3.1.1 None
SRR1167374 MDR-TB lineage3.1.1 None
SRR1169214 MDR-TB lineage3.1.1 None
SRR11972256 Pre-XDR-TB lineage2.2.1 None
SRR1169295 MDR-TB lineage3.1.1 None
SRR1173742 MDR-TB lineage4.4.1.1.1 None
SRR13583408 MDR-TB lineage4.1.2.1 None
SRR13180331 Pre-XDR-TB lineage4.3.1 None
SRR13870402 Pre-XDR-TB lineage4.1.2.1 None
SRR13583428 MDR-TB lineage4.1.2.1 None
SRR1577834 MDR-TB lineage6.1.1 None
SRR14088393 XDR-TB lineage3 None
SRR13870398 Pre-XDR-TB lineage4.1.2.1 None
SRR20969453 MDR-TB lineage4.4.2 None
SRR1577831 MDR-TB lineage6.1.1 None
SRR16058174 MDR-TB lineage4.5 None
SRR18213857 Pre-XDR-TB lineage3.1.2 None
SRR1577820 MDR-TB lineage6.1.1 None
SRR18149473 Other lineage4.4.1.1 None
SRR18593215 Pre-XDR-TB lineage4.8 None
SRR2100854 Pre-XDR-TB lineage3.1.2 None
SRR2100855 Pre-XDR-TB lineage3.1.2 None
SRR21576619 Pre-XDR-TB lineage2.2.2 None
SRR22536492 MDR-TB lineage4.8 None
SRR21576691 Pre-XDR-TB lineage2.2.2 None
SRR21576729 MDR-TB lineage4.5 None
SRR21576666 MDR-TB lineage4.4.2 None
SRR21576706 Pre-XDR-TB lineage2.2.2 None
SRR21576716 Pre-XDR-TB lineage2.2.2 None
ERR11082129 MDR-TB lineage4.8 None
ERR11069009 RR-TB lineage4.8 None
ERR11080965 MDR-TB lineage4.8 None
ERR11081546 Pre-XDR-TB lineage4.1.2.1 None
ERR11081797 MDR-TB lineage4.8 None
ERR11081799 MDR-TB lineage4.8 None
ERR11081858 MDR-TB lineage4.8 None
ERR11082097 MDR-TB lineage4.1.2.1 None
ERR11069028 MDR-TB lineage4.1.2.1 None
ERR11069059 Pre-XDR-TB lineage2.2.1.2 None
ERR11082090 MDR-TB lineage3 None
ERR11082575 MDR-TB lineage2.2.2 None
ERR11082542 MDR-TB lineage4.3.4.2 None
ERR11243563 Pre-XDR-TB None
SRR24114361 Pre-XDR-TB lineage3 None
ERR11243564 Pre-XDR-TB lineage2.2.1 None
SRR3082076 MDR-TB lineage4.6.5 None
ERR11243565 Pre-XDR-TB lineage2.2.1 None
ERR4796380 MDR-TB lineage3 None
ERR4813711 MDR-TB lineage4.1.2.1 None
SRR21887709 Pre-XDR-TB lineage2.2.2 None
SRR3085334 MDR-TB lineage4.2.2.2 None
SRR3082080 MDR-TB lineage4.2.2.2 None
ERR4815303 MDR-TB lineage3.1.1 gb
ERR3275703 HR-TB lineage2.2.1 nl
SRR8380892 MDR-TB lineage4.2.2.2 in
SRR3105748 MDR-TB lineage3 None
SRR3105772 Pre-XDR-TB None
ERR4813038 MDR-TB lineage4.1.2.1 pe
ERR4815470 Pre-XDR-TB lineage3 gb
ERR2179659 MDR-TB lineage4.5 None
ERR176608 Other lineage4.9.1 mw
ERR4813323 MDR-TB lineage4.1.2.1 None
ERR4813388 MDR-TB lineage4.1.2.1 pe
ERR4813607 Pre-XDR-TB lineage4.1.1 None
ERR4813629 MDR-TB lineage4.1.2.1 None
ERR4813154 Pre-XDR-TB lineage4.1.2.1 None
SAMN02403539 MDR-TB lineage3.1.1 za
SAMN02403540 MDR-TB lineage3.1.1 za
ERR4816468 HR-TB lineage1.2.1.2.1 gb
ERR4816720 HR-TB lineage1.2.1.2.1 None
SRR4033335 Other lineage2.2.1 za
ERR2510591 MDR-TB lineage3.1.2 pk
ERR2510505 MDR-TB lineage3 pk
ERR2510546 Pre-XDR-TB lineage3.1.2.1 None
ERR2229524 Other lineage4.8 dk
ERR227983 MDR-TB lineage2.2.1 ru
ERR2510292 Pre-XDR-TB lineage3 pk
ERR229965 MDR-TB lineage2.2.1 ru
ERR4818420 Other lineage3 gb
ERR2510290 Pre-XDR-TB lineage4.6.2 pk
ERR2510602 MDR-TB lineage3 None
ERR234583 MDR-TB lineage4.2.1;lineage2.2.1 ru
ERR2677470 MDR-TB lineage4.3.4.2 de
SRR5485546 MDR-TB None
ERR2510478 Pre-XDR-TB lineage3 pk
SRR5217423 HR-TB lineage2.2.1 None
ERR2516442 MDR-TB lineage4.1.2.1;lineage2.2 None
ERR2516443 MDR-TB lineage2.2.1 None
ERR2446175 HR-TB lineage2.2.1 nl
ERR2514002 Other lineage3 gb
SAMN02053794 MDR-TB lineage4.4.1.1.1 za
ERR2514135 Other lineage3 gb
ERR2517095 MDR-TB lineage3.1.2 gb
ERR4819954 Pre-XDR-TB lineage3 gb
ERR4821780 HR-TB lineage2.2 gb
ERR2516820 MDR-TB lineage3.1.2 gb
ERR2517371 MDR-TB lineage3.1.1 nl
ERR2179655 MDR-TB lineage4.5 cn
SRR5486887 MDR-TB lineage4.1.2.1 None
SRR5486881 Pre-XDR-TB lineage4.1.2.1 None
SRR5486899 MDR-TB lineage4.1.2.1 None
ERR4827592 MDR-TB lineage2.2.1 None
ERR2653079 MDR-TB lineage4.3.4.1 None
SRR5535835 MDR-TB lineage4.3.4.2.1 None
ERR2653184 MDR-TB lineage4.3.4.1 None
ERR2707222 MDR-TB lineage4.3.4.2.1 cd
ERR270739 Pre-XDR-TB lineage3.1.2 None
ERR270752 Pre-XDR-TB lineage3.1.2 None
ERR2706987 MDR-TB lineage4.9 cd
ERR270753 Pre-XDR-TB lineage3.1.2 None
ERR270686 Pre-XDR-TB lineage3.1.2 None
ERR4821961 Pre-XDR-TB lineage3 None
ERR2707113 MDR-TB lineage4.3.4.2.1 cd
SRR5818581 MDR-TB lineage4.2.2.2 dj
SRR5818574 MDR-TB lineage4.6.5 dj
ERR11067245 HR-TB lineage3 None
SRR5818638 MDR-TB lineage4.2.2.2 dj
ERR4829970 MDR-TB lineage3 pk
ERR4830838 Pre-XDR-TB lineage4.2.2.2 et
ERR4830813 MDR-TB lineage4.2.2.2 et
ERR4828957 MDR-TB lineage4.1.2.1 None
ERR4829401 MDR-TB lineage4.1.2.1 it
ERR3148194 MDR-TB lineage1.2.1.2 mx
SRR1723942 MDR-TB lineage4.5 cn
ERR4872082 MDR-TB lineage4.1.4 None
ERR4872101 MDR-TB lineage4.1.4 None
SRR6152767 HR-TB lineage1.2.1.2.1 ca
SRR6153198 HR-TB lineage4.9 ca
ERR4831433 Pre-XDR-TB lineage3 None
ERR4831434 Pre-XDR-TB lineage3 None
ERR4872120 MDR-TB lineage4.1.4 None
ERR4831472 Pre-XDR-TB lineage3 None
ERR4831525 Pre-XDR-TB lineage3 pk
ERR4872124 MDR-TB lineage4.1.4 None
ERR4872186 MDR-TB lineage4.6.2.2 None
ERR4872128 MDR-TB lineage4.6.1.2 None
ERR4872188 MDR-TB lineage4.1.4 None
SRR6964507 MDR-TB lineage3 None
SRR6785477 HR-TB lineage2.2.1 None
SRR6930929 HR-TB lineage2.2.2 None
ERR4872219 MDR-TB lineage4.1.4 None
SRR6964603 Pre-XDR-TB lineage3 None
SRR6964556 RR-TB lineage3;lineage1.1.2 None
SRR6964565 MDR-TB lineage1.1.2 None
SRR6824328 MDR-TB lineage4.5 cn
SRR6964672 Pre-XDR-TB lineage3 None
SRR833044 MDR-TB lineage4.4.1.1.1 None
SRR6824332 MDR-TB lineage4.5 cn
SRR6824373 MDR-TB lineage4.5 cn
ERR3132096 Other lineage4 None
SRR7585421 MDR-TB lineage4.4 None
SRR833102 MDR-TB lineage4.4.1.1 None
SRR8698508 MDR-TB lineage4.1.1 None
SRR7585431 Pre-XDR-TB lineage3 in
SRR7655978 Other lineage4.9 None
DRR130176 Pre-XDR-TB lineage2.2.2 None
DRR130114 Pre-XDR-TB lineage2.2.1 None
DRR130164 Pre-XDR-TB lineage2.2.1 None
ERR067670 HR-TB lineage4.1.2.1 ru
ERR067724 Pre-XDR-TB lineage2.2.1 ru
ERR1034589 Pre-XDR-TB lineage3.1 pk
ERR10680180 MDR-TB lineage4.8 None
ERR1034591 Pre-XDR-TB lineage3.1 pk
ERR1034887 MDR-TB lineage4.6.1.2 pt
ERR1034604 Pre-XDR-TB lineage3 pk
ERR11043680 MDR-TB lineage3 None
ERR108511 MDR-TB lineage2.2.1 ru
ERR10748549 Pre-XDR-TB lineage2.2.2 None
ERR11044093 Other lineage3 None
ERR11043731 MDR-TB lineage4.1.2.1 None
ERR11044294 MDR-TB lineage1.2.1.2.1 None
ERR1203075 HR-TB lineage4.6.2.2 None
ERR11044645 MDR-TB lineage3 None
ERR3256109 Other lineage1.2.1.2.1 ph
ERR1213862 Other lineage4 kr
ERR11049157 Other lineage3 None
ERR3287341 MDR-TB lineage4.1.2.1 pe
ERR3273132 Pre-XDR-TB lineage2.2.2 None
ERR3287327 Pre-XDR-TB lineage4.1.2.1 None
ERR3335727 MDR-TB lineage3 pk
ERR3287809 MDR-TB lineage4.1.2.1 pe
ERR3287349 MDR-TB lineage4.1.2.1 pe
ERR3287723 MDR-TB lineage4.3.3 pe
ERR3287859 MDR-TB lineage4.1.1 pe
ERR4024698 MDR-TB lineage4.1.2.1 None
ERR3439479 Other La1.8.1 None
ERR4011933 MDR-TB lineage4.6.3;lineage3.1.1 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR4423751 MDR-TB lineage4.3.4.2.1 None
ERR4423474 Pre-XDR-TB lineage2.2.2 None
ERR4407548 HR-TB lineage4.1.2.1 None
ERR4423752 MDR-TB lineage4.3.4.2.1 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4553480 Pre-XDR-TB None
ERR4457817 MDR-TB lineage4.1.2.1 None
ERR4553527 MDR-TB None
ERR4553545 Pre-XDR-TB None
ERR4553525 MDR-TB lineage1.2.2.2 None
ERR4553541 MDR-TB lineage1.1.3.1 None
ERR4553629 Pre-XDR-TB None
ERR4553607 MDR-TB None
ERR4553666 MDR-TB None
ERR4553659 Pre-XDR-TB lineage2.2.2 None
ERR4553671 MDR-TB lineage2.2 None
ERR4553634 MDR-TB None
ERR4553825 MDR-TB lineage2.2 None
ERR4553725 MDR-TB lineage2.2.2 None
ERR4553788 MDR-TB None
ERR4553872 Pre-XDR-TB lineage2.2 None
ERR4553868 Pre-XDR-TB lineage2.2 None
ERR4553877 Pre-XDR-TB lineage2.2 None
ERR4796503 XDR-TB lineage3 in
ERR4796714 MDR-TB lineage3 in
ERR4796594 Pre-XDR-TB lineage3 in
ERR4797178 Pre-XDR-TB lineage3 in
ERR4797100 MDR-TB lineage3;lineage1.1.2 in
ERR4797591 MDR-TB lineage3 in
ERR4797370 Pre-XDR-TB lineage3 in
ERR4797504 Pre-XDR-TB lineage2.2.1 in
ERR4797305 MDR-TB lineage3 in
ERR4797606 MDR-TB lineage3 in
ERR4797612 MDR-TB lineage3 in
ERR4798054 MDR-TB lineage1.2.2.2 in
ERR4797815 MDR-TB lineage1.2.2.2 in
ERR4797747 Pre-XDR-TB lineage3 in
ERR4797963 MDR-TB lineage3 in
ERR4798517 MDR-TB lineage3.1 in
ERR4798290 Pre-XDR-TB lineage3 in
ERR4798704 MDR-TB lineage3 in
ERR4798672 HR-TB lineage1.1.2 in
ERR4799474 Pre-XDR-TB lineage3;lineage2.2.1 in
ERR4798750 Pre-XDR-TB lineage3 in
ERR4799533 MDR-TB lineage3 None
ERR4799965 Pre-XDR-TB lineage3.1 in
ERR4799592 Pre-XDR-TB lineage3 in
ERR4799702 MDR-TB lineage3 in
ERR4799691 MDR-TB lineage3 in
ERR4800367 Pre-XDR-TB lineage4.8;lineage2.2.1 in
ERR4800710 MDR-TB lineage3 None
ERR4800413 MDR-TB lineage3 in
ERR4811869 MDR-TB lineage4.1.2.1 pe
ERR4812643 HR-TB lineage4.1.2.1 None
ERR4811993 MDR-TB lineage4.1.2.1 pe
ERR5987405 Pre-XDR-TB lineage2.2.2 None
ERR5987260 Pre-XDR-TB lineage2.2.2 None
ERR5918009 Pre-XDR-TB lineage2.2.2 za
ERR6358743 Pre-XDR-TB lineage4.6.1.2 None
ERR6358710 MDR-TB lineage4.6.1.1 None
ERR6358759 MDR-TB lineage4.6.1.2 None
ERR688036 Pre-XDR-TB lineage3 None
ERR6866891 MDR-TB lineage4.3.3 None
ERR688023 Pre-XDR-TB lineage3.1 None
ERR6358864 MDR-TB lineage4.6.1.1 None
ERR6358867 MDR-TB lineage4.6.1.1 None
ERR688021 Pre-XDR-TB lineage3.1 None
ERR751555 MDR-TB lineage4.1.2.1 pe
ERR751440 MDR-TB lineage4.1.2.1 pe
ERR7737726 HR-TB None
ERR7737643 MDR-TB lineage1.1.1.1 None
ERR7737664 MDR-TB lineage2.2.2 None
ERR7737942 MDR-TB lineage4.2.2.2 None
ERR7737741 MDR-TB lineage3.1.1 None
ERR7737817 MDR-TB lineage4.2.2.2 None
ERR7911476 MDR-TB lineage2.2.2 vn
ERR779913 MDR-TB lineage4.1.2.1 pe
ERR779916 MDR-TB lineage4.1.2.1 pe
ERR7975647 MDR-TB lineage4.1.2.1 None
ERR7975633 Pre-XDR-TB lineage4.1.2.1 None
ERR7975635 Pre-XDR-TB lineage4.1.2.1 None
ERR9119507 MDR-TB lineage4.1.4 None
ERR9029863 Pre-XDR-TB lineage4.1.2.1 None
ERR9119488 MDR-TB lineage4.1.4 None
ERR9119534 MDR-TB lineage4.6.1.2 None
ERR8774247 Pre-XDR-TB lineage2.2.2 None
ERR9119526 MDR-TB lineage4.1.4 None
ERR9119586 MDR-TB lineage4.1.4 None
ERR9119584 MDR-TB lineage4.6.2.2 None
ERR9119530 MDR-TB lineage4.1.4 None
ERR9120023 Pre-XDR-TB lineage2.2.2 None
ERR9119613 MDR-TB lineage4.1.4 None
ERR9120022 Pre-XDR-TB lineage2.2.2 None
ERR9992760 Pre-XDR-TB lineage2.2.2 None
ERR9125714 MDR-TB lineage4.5 None
ERR987747 MDR-TB lineage3 None
ERR9992890 MDR-TB lineage4.4.1.1 None
ERR9992954 Pre-XDR-TB lineage2.2.2 None