EBG00000313325 - n.906A>G
Drug resistance types
0 Sensitive
2 RR-TB
17 HR-TB
169 MDR-TB
86 Pre-XDR-TB
2 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 12 |
| lineage4.1.2.1 | 41 |
| lineage2.2.1 | 17 |
| lineage4.4.1.1.1 | 3 |
| lineage4.3.1 | 1 |
| lineage6.1.1 | 3 |
| lineage3 | 53 |
| lineage4.4.2 | 2 |
| lineage4.5 | 9 |
| lineage3.1.2 | 10 |
| lineage4.4.1.1 | 3 |
| lineage4.8 | 10 |
| lineage2.2.2 | 23 |
| lineage2.2.1.2 | 1 |
| lineage4.3.4.2 | 2 |
| 12 | |
| lineage4.6.5 | 2 |
| lineage4.2.2.2 | 9 |
| lineage4.9.1 | 1 |
| lineage4.1.1 | 3 |
| lineage1.2.1.2.1 | 5 |
| lineage3.1.2.1 | 1 |
| lineage4.6.2 | 1 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4.1.2.1;lineage2.2 | 1 |
| lineage2.2 | 6 |
| lineage4.3.4.1 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage4.9 | 3 |
| lineage1.2.1.2 | 1 |
| lineage4.1.4 | 12 |
| lineage4.6.2.2 | 3 |
| lineage4.6.1.2 | 5 |
| lineage3;lineage1.1.2 | 2 |
| lineage1.1.2 | 2 |
| lineage4 | 2 |
| lineage4.4 | 1 |
| lineage3.1 | 6 |
| lineage4.3.3 | 2 |
| La1.8.1 | 1 |
| lineage4.6.3;lineage3.1.1 | 1 |
| lineage1.2.2.2 | 3 |
| lineage1.1.3.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.8;lineage2.2.1 | 1 |
| lineage4.6.1.1 | 3 |
| lineage1.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 290 |
Geographic prevalence
Country level data for this variant is available for 101 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1165657 | MDR-TB | lineage3.1.1 | None | SRR10525360 | MDR-TB | lineage4.1.2.1 | None | SRR1167370 | MDR-TB | lineage3.1.1 | None | SRR1169265 | MDR-TB | lineage3.1.1 | None | SRR1169227 | MDR-TB | lineage3.1.1 | None | SRR1167374 | MDR-TB | lineage3.1.1 | None | SRR1169214 | MDR-TB | lineage3.1.1 | None | SRR11972256 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169295 | MDR-TB | lineage3.1.1 | None | SRR1173742 | MDR-TB | lineage4.4.1.1.1 | None | SRR13583408 | MDR-TB | lineage4.1.2.1 | None | SRR13180331 | Pre-XDR-TB | lineage4.3.1 | None | SRR13870402 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13583428 | MDR-TB | lineage4.1.2.1 | None | SRR1577834 | MDR-TB | lineage6.1.1 | None | SRR14088393 | XDR-TB | lineage3 | None | SRR13870398 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR20969453 | MDR-TB | lineage4.4.2 | None | SRR1577831 | MDR-TB | lineage6.1.1 | None | SRR16058174 | MDR-TB | lineage4.5 | None | SRR18213857 | Pre-XDR-TB | lineage3.1.2 | None | SRR1577820 | MDR-TB | lineage6.1.1 | None | SRR18149473 | Other | lineage4.4.1.1 | None | SRR18593215 | Pre-XDR-TB | lineage4.8 | None | SRR2100854 | Pre-XDR-TB | lineage3.1.2 | None | SRR2100855 | Pre-XDR-TB | lineage3.1.2 | None | SRR21576619 | Pre-XDR-TB | lineage2.2.2 | None | SRR22536492 | MDR-TB | lineage4.8 | None | SRR21576691 | Pre-XDR-TB | lineage2.2.2 | None | SRR21576729 | MDR-TB | lineage4.5 | None | SRR21576666 | MDR-TB | lineage4.4.2 | None | SRR21576706 | Pre-XDR-TB | lineage2.2.2 | None | SRR21576716 | Pre-XDR-TB | lineage2.2.2 | None | ERR11082129 | MDR-TB | lineage4.8 | None | ERR11069009 | RR-TB | lineage4.8 | None | ERR11080965 | MDR-TB | lineage4.8 | None | ERR11081546 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11081797 | MDR-TB | lineage4.8 | None | ERR11081799 | MDR-TB | lineage4.8 | None | ERR11081858 | MDR-TB | lineage4.8 | None | ERR11082097 | MDR-TB | lineage4.1.2.1 | None | ERR11069028 | MDR-TB | lineage4.1.2.1 | None | ERR11069059 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR11082090 | MDR-TB | lineage3 | None | ERR11082575 | MDR-TB | lineage2.2.2 | None | ERR11082542 | MDR-TB | lineage4.3.4.2 | None | ERR11243563 | Pre-XDR-TB | None | SRR24114361 | Pre-XDR-TB | lineage3 | None | ERR11243564 | Pre-XDR-TB | lineage2.2.1 | None | SRR3082076 | MDR-TB | lineage4.6.5 | None | ERR11243565 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796380 | MDR-TB | lineage3 | None | ERR4813711 | MDR-TB | lineage4.1.2.1 | None | SRR21887709 | Pre-XDR-TB | lineage2.2.2 | None | SRR3085334 | MDR-TB | lineage4.2.2.2 | None | SRR3082080 | MDR-TB | lineage4.2.2.2 | None | ERR4815303 | MDR-TB | lineage3.1.1 | gb | ERR3275703 | HR-TB | lineage2.2.1 | nl | SRR8380892 | MDR-TB | lineage4.2.2.2 | in | SRR3105748 | MDR-TB | lineage3 | None | SRR3105772 | Pre-XDR-TB | None | ERR4813038 | MDR-TB | lineage4.1.2.1 | pe | ERR4815470 | Pre-XDR-TB | lineage3 | gb | ERR2179659 | MDR-TB | lineage4.5 | None | ERR176608 | Other | lineage4.9.1 | mw | ERR4813323 | MDR-TB | lineage4.1.2.1 | None | ERR4813388 | MDR-TB | lineage4.1.2.1 | pe | ERR4813607 | Pre-XDR-TB | lineage4.1.1 | None | ERR4813629 | MDR-TB | lineage4.1.2.1 | None | ERR4813154 | Pre-XDR-TB | lineage4.1.2.1 | None | SAMN02403539 | MDR-TB | lineage3.1.1 | za | SAMN02403540 | MDR-TB | lineage3.1.1 | za | ERR4816468 | HR-TB | lineage1.2.1.2.1 | gb | ERR4816720 | HR-TB | lineage1.2.1.2.1 | None | SRR4033335 | Other | lineage2.2.1 | za | ERR2510591 | MDR-TB | lineage3.1.2 | pk | ERR2510505 | MDR-TB | lineage3 | pk | ERR2510546 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR2229524 | Other | lineage4.8 | dk | ERR227983 | MDR-TB | lineage2.2.1 | ru | ERR2510292 | Pre-XDR-TB | lineage3 | pk | ERR229965 | MDR-TB | lineage2.2.1 | ru | ERR4818420 | Other | lineage3 | gb | ERR2510290 | Pre-XDR-TB | lineage4.6.2 | pk | ERR2510602 | MDR-TB | lineage3 | None | ERR234583 | MDR-TB | lineage4.2.1;lineage2.2.1 | ru | ERR2677470 | MDR-TB | lineage4.3.4.2 | de | SRR5485546 | MDR-TB | None | ERR2510478 | Pre-XDR-TB | lineage3 | pk | SRR5217423 | HR-TB | lineage2.2.1 | None | ERR2516442 | MDR-TB | lineage4.1.2.1;lineage2.2 | None | ERR2516443 | MDR-TB | lineage2.2.1 | None | ERR2446175 | HR-TB | lineage2.2.1 | nl | ERR2514002 | Other | lineage3 | gb | SAMN02053794 | MDR-TB | lineage4.4.1.1.1 | za | ERR2514135 | Other | lineage3 | gb | ERR2517095 | MDR-TB | lineage3.1.2 | gb | ERR4819954 | Pre-XDR-TB | lineage3 | gb | ERR4821780 | HR-TB | lineage2.2 | gb | ERR2516820 | MDR-TB | lineage3.1.2 | gb | ERR2517371 | MDR-TB | lineage3.1.1 | nl | ERR2179655 | MDR-TB | lineage4.5 | cn | SRR5486887 | MDR-TB | lineage4.1.2.1 | None | SRR5486881 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR5486899 | MDR-TB | lineage4.1.2.1 | None | ERR4827592 | MDR-TB | lineage2.2.1 | None | ERR2653079 | MDR-TB | lineage4.3.4.1 | None | SRR5535835 | MDR-TB | lineage4.3.4.2.1 | None | ERR2653184 | MDR-TB | lineage4.3.4.1 | None | ERR2707222 | MDR-TB | lineage4.3.4.2.1 | cd | ERR270739 | Pre-XDR-TB | lineage3.1.2 | None | ERR270752 | Pre-XDR-TB | lineage3.1.2 | None | ERR2706987 | MDR-TB | lineage4.9 | cd | ERR270753 | Pre-XDR-TB | lineage3.1.2 | None | ERR270686 | Pre-XDR-TB | lineage3.1.2 | None | ERR4821961 | Pre-XDR-TB | lineage3 | None | ERR2707113 | MDR-TB | lineage4.3.4.2.1 | cd | SRR5818581 | MDR-TB | lineage4.2.2.2 | dj | SRR5818574 | MDR-TB | lineage4.6.5 | dj | ERR11067245 | HR-TB | lineage3 | None | SRR5818638 | MDR-TB | lineage4.2.2.2 | dj | ERR4829970 | MDR-TB | lineage3 | pk | ERR4830838 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR4830813 | MDR-TB | lineage4.2.2.2 | et | ERR4828957 | MDR-TB | lineage4.1.2.1 | None | ERR4829401 | MDR-TB | lineage4.1.2.1 | it | ERR3148194 | MDR-TB | lineage1.2.1.2 | mx | SRR1723942 | MDR-TB | lineage4.5 | cn | ERR4872082 | MDR-TB | lineage4.1.4 | None | ERR4872101 | MDR-TB | lineage4.1.4 | None | SRR6152767 | HR-TB | lineage1.2.1.2.1 | ca | SRR6153198 | HR-TB | lineage4.9 | ca | ERR4831433 | Pre-XDR-TB | lineage3 | None | ERR4831434 | Pre-XDR-TB | lineage3 | None | ERR4872120 | MDR-TB | lineage4.1.4 | None | ERR4831472 | Pre-XDR-TB | lineage3 | None | ERR4831525 | Pre-XDR-TB | lineage3 | pk | ERR4872124 | MDR-TB | lineage4.1.4 | None | ERR4872186 | MDR-TB | lineage4.6.2.2 | None | ERR4872128 | MDR-TB | lineage4.6.1.2 | None | ERR4872188 | MDR-TB | lineage4.1.4 | None | SRR6964507 | MDR-TB | lineage3 | None | SRR6785477 | HR-TB | lineage2.2.1 | None | SRR6930929 | HR-TB | lineage2.2.2 | None | ERR4872219 | MDR-TB | lineage4.1.4 | None | SRR6964603 | Pre-XDR-TB | lineage3 | None | SRR6964556 | RR-TB | lineage3;lineage1.1.2 | None | SRR6964565 | MDR-TB | lineage1.1.2 | None | SRR6824328 | MDR-TB | lineage4.5 | cn | SRR6964672 | Pre-XDR-TB | lineage3 | None | SRR833044 | MDR-TB | lineage4.4.1.1.1 | None | SRR6824332 | MDR-TB | lineage4.5 | cn | SRR6824373 | MDR-TB | lineage4.5 | cn | ERR3132096 | Other | lineage4 | None | SRR7585421 | MDR-TB | lineage4.4 | None | SRR833102 | MDR-TB | lineage4.4.1.1 | None | SRR8698508 | MDR-TB | lineage4.1.1 | None | SRR7585431 | Pre-XDR-TB | lineage3 | in | SRR7655978 | Other | lineage4.9 | None | DRR130176 | Pre-XDR-TB | lineage2.2.2 | None | DRR130114 | Pre-XDR-TB | lineage2.2.1 | None | DRR130164 | Pre-XDR-TB | lineage2.2.1 | None | ERR067670 | HR-TB | lineage4.1.2.1 | ru | ERR067724 | Pre-XDR-TB | lineage2.2.1 | ru | ERR1034589 | Pre-XDR-TB | lineage3.1 | pk | ERR10680180 | MDR-TB | lineage4.8 | None | ERR1034591 | Pre-XDR-TB | lineage3.1 | pk | ERR1034887 | MDR-TB | lineage4.6.1.2 | pt | ERR1034604 | Pre-XDR-TB | lineage3 | pk | ERR11043680 | MDR-TB | lineage3 | None | ERR108511 | MDR-TB | lineage2.2.1 | ru | ERR10748549 | Pre-XDR-TB | lineage2.2.2 | None | ERR11044093 | Other | lineage3 | None | ERR11043731 | MDR-TB | lineage4.1.2.1 | None | ERR11044294 | MDR-TB | lineage1.2.1.2.1 | None | ERR1203075 | HR-TB | lineage4.6.2.2 | None | ERR11044645 | MDR-TB | lineage3 | None | ERR3256109 | Other | lineage1.2.1.2.1 | ph | ERR1213862 | Other | lineage4 | kr | ERR11049157 | Other | lineage3 | None | ERR3287341 | MDR-TB | lineage4.1.2.1 | pe | ERR3273132 | Pre-XDR-TB | lineage2.2.2 | None | ERR3287327 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR3335727 | MDR-TB | lineage3 | pk | ERR3287809 | MDR-TB | lineage4.1.2.1 | pe | ERR3287349 | MDR-TB | lineage4.1.2.1 | pe | ERR3287723 | MDR-TB | lineage4.3.3 | pe | ERR3287859 | MDR-TB | lineage4.1.1 | pe | ERR4024698 | MDR-TB | lineage4.1.2.1 | None | ERR3439479 | Other | La1.8.1 | None | ERR4011933 | MDR-TB | lineage4.6.3;lineage3.1.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4423751 | MDR-TB | lineage4.3.4.2.1 | None | ERR4423474 | Pre-XDR-TB | lineage2.2.2 | None | ERR4407548 | HR-TB | lineage4.1.2.1 | None | ERR4423752 | MDR-TB | lineage4.3.4.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4553480 | Pre-XDR-TB | None | ERR4457817 | MDR-TB | lineage4.1.2.1 | None | ERR4553527 | MDR-TB | None | ERR4553545 | Pre-XDR-TB | None | ERR4553525 | MDR-TB | lineage1.2.2.2 | None | ERR4553541 | MDR-TB | lineage1.1.3.1 | None | ERR4553629 | Pre-XDR-TB | None | ERR4553607 | MDR-TB | None | ERR4553666 | MDR-TB | None | ERR4553659 | Pre-XDR-TB | lineage2.2.2 | None | ERR4553671 | MDR-TB | lineage2.2 | None | ERR4553634 | MDR-TB | None | ERR4553825 | MDR-TB | lineage2.2 | None | ERR4553725 | MDR-TB | lineage2.2.2 | None | ERR4553788 | MDR-TB | None | ERR4553872 | Pre-XDR-TB | lineage2.2 | None | ERR4553868 | Pre-XDR-TB | lineage2.2 | None | ERR4553877 | Pre-XDR-TB | lineage2.2 | None | ERR4796503 | XDR-TB | lineage3 | in | ERR4796714 | MDR-TB | lineage3 | in | ERR4796594 | Pre-XDR-TB | lineage3 | in | ERR4797178 | Pre-XDR-TB | lineage3 | in | ERR4797100 | MDR-TB | lineage3;lineage1.1.2 | in | ERR4797591 | MDR-TB | lineage3 | in | ERR4797370 | Pre-XDR-TB | lineage3 | in | ERR4797504 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797305 | MDR-TB | lineage3 | in | ERR4797606 | MDR-TB | lineage3 | in | ERR4797612 | MDR-TB | lineage3 | in | ERR4798054 | MDR-TB | lineage1.2.2.2 | in | ERR4797815 | MDR-TB | lineage1.2.2.2 | in | ERR4797747 | Pre-XDR-TB | lineage3 | in | ERR4797963 | MDR-TB | lineage3 | in | ERR4798517 | MDR-TB | lineage3.1 | in | ERR4798290 | Pre-XDR-TB | lineage3 | in | ERR4798704 | MDR-TB | lineage3 | in | ERR4798672 | HR-TB | lineage1.1.2 | in | ERR4799474 | Pre-XDR-TB | lineage3;lineage2.2.1 | in | ERR4798750 | Pre-XDR-TB | lineage3 | in | ERR4799533 | MDR-TB | lineage3 | None | ERR4799965 | Pre-XDR-TB | lineage3.1 | in | ERR4799592 | Pre-XDR-TB | lineage3 | in | ERR4799702 | MDR-TB | lineage3 | in | ERR4799691 | MDR-TB | lineage3 | in | ERR4800367 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | in | ERR4800710 | MDR-TB | lineage3 | None | ERR4800413 | MDR-TB | lineage3 | in | ERR4811869 | MDR-TB | lineage4.1.2.1 | pe | ERR4812643 | HR-TB | lineage4.1.2.1 | None | ERR4811993 | MDR-TB | lineage4.1.2.1 | pe | ERR5987405 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987260 | Pre-XDR-TB | lineage2.2.2 | None | ERR5918009 | Pre-XDR-TB | lineage2.2.2 | za | ERR6358743 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR6358710 | MDR-TB | lineage4.6.1.1 | None | ERR6358759 | MDR-TB | lineage4.6.1.2 | None | ERR688036 | Pre-XDR-TB | lineage3 | None | ERR6866891 | MDR-TB | lineage4.3.3 | None | ERR688023 | Pre-XDR-TB | lineage3.1 | None | ERR6358864 | MDR-TB | lineage4.6.1.1 | None | ERR6358867 | MDR-TB | lineage4.6.1.1 | None | ERR688021 | Pre-XDR-TB | lineage3.1 | None | ERR751555 | MDR-TB | lineage4.1.2.1 | pe | ERR751440 | MDR-TB | lineage4.1.2.1 | pe | ERR7737726 | HR-TB | None | ERR7737643 | MDR-TB | lineage1.1.1.1 | None | ERR7737664 | MDR-TB | lineage2.2.2 | None | ERR7737942 | MDR-TB | lineage4.2.2.2 | None | ERR7737741 | MDR-TB | lineage3.1.1 | None | ERR7737817 | MDR-TB | lineage4.2.2.2 | None | ERR7911476 | MDR-TB | lineage2.2.2 | vn | ERR779913 | MDR-TB | lineage4.1.2.1 | pe | ERR779916 | MDR-TB | lineage4.1.2.1 | pe | ERR7975647 | MDR-TB | lineage4.1.2.1 | None | ERR7975633 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR7975635 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9119507 | MDR-TB | lineage4.1.4 | None | ERR9029863 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9119488 | MDR-TB | lineage4.1.4 | None | ERR9119534 | MDR-TB | lineage4.6.1.2 | None | ERR8774247 | Pre-XDR-TB | lineage2.2.2 | None | ERR9119526 | MDR-TB | lineage4.1.4 | None | ERR9119586 | MDR-TB | lineage4.1.4 | None | ERR9119584 | MDR-TB | lineage4.6.2.2 | None | ERR9119530 | MDR-TB | lineage4.1.4 | None | ERR9120023 | Pre-XDR-TB | lineage2.2.2 | None | ERR9119613 | MDR-TB | lineage4.1.4 | None | ERR9120022 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992760 | Pre-XDR-TB | lineage2.2.2 | None | ERR9125714 | MDR-TB | lineage4.5 | None | ERR987747 | MDR-TB | lineage3 | None | ERR9992890 | MDR-TB | lineage4.4.1.1 | None | ERR9992954 | Pre-XDR-TB | lineage2.2.2 | None |
|---|
