Rv1221 - c.339C>G
Drug resistance types
7 Sensitive
6 RR-TB
25 HR-TB
14 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2.1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage4.9 | 41 |
| La2;lineage4.9 | 1 |
| lineage4.1.3 | 2 |
| M.canetti;lineage4.9 | 2 |
| La1.7 | 2 |
| lineage3.1;lineage9 | 1 |
| lineage3 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage2.2 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1 | 2 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 82 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675246 | Other | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816656 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR16156817 | Other | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR926164 | Other | lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | ERR926165 | Other | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
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