Rv2447c - c.204T>C


Drug resistance types
15 Sensitive 5 RR-TB 154 HR-TB 11 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 78 Other
lineage Counts
lineage Count
lineage9;lineage3.1 1
lineage2 3
lineage6.3;lineage4.9;lineage2.1 1
166
lineage4.9 31
lineage6.3;lineage2.2.1 1
lineage4.1.1.1 1
lineage4.1 1
lineage4.1.1 1
lineage4.3.4 1
lineage2.2.1 8
lineage2.1 2
lineage4.3 1
lineage4 17
lineage4.1.1.3 1
lineage2.2 4
La1.8.1 3
lineage3 1
lineage4.3.3 3
lineage4.1.2.1 5
lineage1.1 1
lineage3.1 3
La2 1
La1 2
lineage1.1.2 1
lineage4.3.4.2.1 1
lineage4.1.2.1.1 1
lineage4.3.2 2
lineage2.2.2 1
lineage4.4.1.1.1 1
lineage2.2.1.1 1
lineage1.1.1 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 269
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR20969677 HR-TB lineage2 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR25827682 Other None
SRR26159043 Other lineage4.9 None
ERR4815604 HR-TB None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR176778 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR3675482 HR-TB None
ERR176779 HR-TB None
ERR1035239 HR-TB None
SRR6325445 HR-TB None
ERR176793 Other lineage4.1.1 None
SRR3675465 HR-TB None
ERR158583 HR-TB None
ERR4814331 Sensitive lineage4.9 None
ERR161039 Sensitive lineage4.3.4 None
ERR4814352 HR-TB lineage2.2.1 None
ERR161033 HR-TB None
SRR3675488 HR-TB None
SRR3675236 HR-TB None
SRR3416776 Other lineage2.1 None
ERR181744 HR-TB None
SRR3675486 HR-TB None
SRR3675221 HR-TB None
SRR3675222 Other None
SRR3675558 HR-TB None
ERR176643 HR-TB None
ERR176651 HR-TB None
ERR181887 HR-TB None
SRR3675383 HR-TB None
SRR3675502 Other None
ERR4816999 Other None
SRR3675545 HR-TB None
ERR212034 HR-TB None
SRR3675234 Other None
SRR3675501 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675312 HR-TB lineage4 None
ERR176751 HR-TB None
SRR3675510 Other None
ERR212001 HR-TB None
SRR3675550 Other None
ERR212125 HR-TB lineage4 None
ERR212123 Other None
ERR502912 Other lineage2.2.1 None
ERR212121 HR-TB None
SRR3675574 HR-TB None
SRR3742665 HR-TB None
SRR3675571 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816585 Other lineage2.2 None
ERR4816656 HR-TB None
ERR2514692 Other None
ERR4818021 Other La1.8.1 None
ERR234659 HR-TB None
ERR4818929 HR-TB None
SRR5341418 Other None
ERR1035138 MDR-TB None
SRR5341197 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR4818615 Other None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341330 HR-TB None
SRR5341302 HR-TB None
SRR5341333 HR-TB None
SRR5535933 HR-TB None
ERR4821053 Other lineage3 None
ERR2693257 Other None
SRR6045526 HR-TB None
ERR2693231 Other None
ERR2693239 HR-TB None
ERR2693230 Other None
ERR2693254 Other None
SRR6045519 HR-TB None
SRR6046133 HR-TB None
SRR6045555 HR-TB None
ERR2693227 Other lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6044790 HR-TB None
SRR6044855 Other lineage4.9 None
SRR6046397 Other None
SRR6044890 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6045233 HR-TB None
SRR6046225 HR-TB None
ERR278594 HR-TB None
SRR6044876 Sensitive lineage4 None
SRR6045327 HR-TB None
SRR6046066 HR-TB None
SRR6325442 HR-TB None
SRR6046540 HR-TB None
SRR6046482 HR-TB None
ERR4830353 Other None
SRR6325444 HR-TB None
SRR6046514 HR-TB None
SRR6325448 HR-TB None
ERR3077961 MDR-TB lineage4.3.3 None
SRR6046594 HR-TB lineage4 None
SRR6325447 HR-TB None
SRR6046824 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046644 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR3077978 Other lineage1.1 None
ERR323037 HR-TB lineage4 None
ERR323034 HR-TB lineage3.1 None
SRR6789626 Other None
ERR294266 HR-TB None
ERR4831724 HR-TB lineage2.2 None
ERR294248 HR-TB None
ERR502524 HR-TB La2 None
ERR323036 HR-TB None
ERR5311099 HR-TB None
ERR502532 HR-TB None
ERR5311090 HR-TB None
ERR502889 Other None
ERR5311081 HR-TB None
SRR7496517 Other None
SRR8217918 HR-TB None
SRR7496509 Other None
ERR323038 HR-TB None
SRR7535086 Other None
ERR323043 HR-TB None
ERR323041 HR-TB None
ERR323045 HR-TB None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR323063 HR-TB None
ERR067681 HR-TB None
ERR1063859 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR1035157 Other lineage4.9 None
ERR133986 HR-TB None
ERR108471 HR-TB lineage4 None
ERR3283028 Other None
ERR3283010 Other La1 None
ERR3283017 HR-TB None
ERR3283025 HR-TB None
ERR3283021 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283024 Other None
ERR3283027 HR-TB None
ERR3283043 Other lineage4.9 None
ERR3283040 HR-TB None
ERR3283032 HR-TB None
ERR3283036 HR-TB None
ERR3283047 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283058 Other lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3439432 Other None
ERR3797014 Other None
ERR3797015 HR-TB None
ERR3445503 HR-TB None
ERR3468544 HR-TB None
ERR3797016 HR-TB None
ERR3797047 HR-TB lineage4 None
ERR3797017 Other None
ERR3797023 HR-TB La1.8.1 None
ERR3797043 HR-TB None
ERR3797036 HR-TB None
ERR3797069 Other None
ERR3797061 Other None
ERR3797044 Other None
ERR3797048 HR-TB None
ERR3797083 HR-TB None
ERR3797063 HR-TB None
ERR3797082 Other lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR4188350 HR-TB None
ERR403298 HR-TB lineage4 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR473323 HR-TB lineage4.9 None
ERR473332 Other lineage4 None
ERR473334 HR-TB lineage4.9 None
ERR5336148 Other None
ERR4810624 HR-TB lineage2.2 None
ERR4798262 HR-TB La1 None
ERR4798406 HR-TB None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR6358837 HR-TB None
ERR736831 HR-TB lineage4.9 None
ERR6358991 HR-TB None
ERR702406 HR-TB None
ERR9117709 HR-TB None
ERR736837 Other lineage4.9 None
ERR736835 HR-TB None
ERR736839 Other None
ERR736867 HR-TB None
ERR736874 HR-TB None
SRR21733183 RR-TB lineage1.1.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR736856 HR-TB lineage4 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR8976043 HR-TB None
ERR9117805 Other lineage4.3.2 None
SRR1162864 HR-TB lineage4.1.2.1 None
ERR9119669 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1172728 MDR-TB None
SRR1172234 Other None
SRR1169194 Other None
SRR1172310 HR-TB None
SRR1172951 Other None
SRR1172857 MDR-TB None
SRR1172987 HR-TB lineage4.9 None
SRR1173118 Other None
SRR1173484 Other lineage4 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173363 HR-TB None
SRR1173384 Other lineage4 None
SRR1173400 Other None
SRR1173778 Other None
SRR1173706 Other lineage4.9 None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1181390 Sensitive lineage2 None
SRR1173788 Other None
SRR1175090 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR1180399 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1175049 RR-TB None
SRR1175512 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1184294 HR-TB None
SRR1183049 Other lineage2.2 None
SRR1183106 Other lineage2.2.1.1 None
SRR1196494 MDR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184388 Other None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1196768 MDR-TB None
SRR1196546 HR-TB None
SRR1196566 HR-TB None
SRR13837566 Other lineage4.9 None
SRR12142341 HR-TB None
SRR12416824 HR-TB None
SRR13861251 RR-TB lineage4.9 None
SRR13861424 RR-TB lineage4.9 None
SRR13861549 RR-TB lineage4.9 None
SRR15368973 Other None
SRR1710057 Other lineage2.1 None
SRR14066533 Sensitive lineage1.1.1 None
SRR1640750 HR-TB None
SRR1791696 Other La1.8.1 None
SRR18213713 HR-TB lineage4.5 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None