Rv0001 - c.1080C>G
Drug resistance types
0 Sensitive
0 RR-TB
10 HR-TB
3 MDR-TB
0 Pre-XDR-TB
3 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.1;lineage4.8 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.9 | 3 |
| lineage4.6.3;lineage4.9 | 1 |
| 2 | |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 24 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6044835 | Other | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR212001 | HR-TB | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR9786843 | Other | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR26399265 | Other | lineage2.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None |
|---|
