Rv3246c - c.73C>T
Drug resistance types
5 Sensitive
6 RR-TB
12 HR-TB
7 MDR-TB
1 Pre-XDR-TB
3 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7.1 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage4.9 | 13 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage3 | 4 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
| lineage4.1;lineage4.8 | 1 |
| La1.7 | 1 |
| La1;lineage4.9 | 2 |
| La1.2 | 1 |
| M.canetti;lineage4.9 | 3 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.8 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage2.2 | 2 |
| 1 | |
| lineage3.1;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 52 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR2515074 | Sensitive | lineage3 | gb | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR4830353 | HR-TB | La1.7 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR6198317 | Other | La1.2 | None | ERR4820259 | Sensitive | lineage3 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR6046594 | Other | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR2513513 | Sensitive | lineage3 | gb | SRR3675461 | RR-TB | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR9786843 | Other | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None |
|---|
