lineage | Count |
---|---|
lineage4.9 | 15 |
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
lineage2.1;lineage4.9 | 1 |
M.canetti;lineage1 | 1 |
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
La1.7.X-unk4;lineage4.9 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
lineage4.8 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
M.canetti;lineage4.9 | 4 |
lineage3.1;lineage9 | 1 |
lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
lineage4.9;lineage9 | 1 |
spoligotype | Count |
---|---|
None | 34 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR5535933 | Other | lineage4.9 | None |
ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
SRR15014655 | Other | M.canetti;lineage1 | None |
SRR6044942 | HR-TB | lineage4.9 | None |
ERR6359082 | Other | lineage4.9 | None |
SRR11662690 | HR-TB | lineage4.9 | None |
ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None |
ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
ERR4799025 | Other | lineage4.8 | None |
SRR14782054 | Other | lineage4.9 | None |
SRR5341330 | Other | lineage4.9 | None |
ERR212123 | Other | lineage4.9 | None |
SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
SRR8217918 | HR-TB | lineage4.9 | None |
ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
SRR3675449 | Other | M.canetti;lineage4.9 | None |
SRR14782405 | HR-TB | lineage4.9 | None |
SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None |
ERR3797046 | HR-TB | lineage4.9 | None |
SRR6045233 | Other | M.canetti;lineage4.9 | None |
SRR5341456 | Other | lineage4.9 | None |
ERR4811493 | HR-TB | lineage4.9 | None |
SRR10808730 | Other | lineage4.9 | None |
SRR25827418 | XDR-TB | lineage3.1;lineage9 | None |
ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
ERR3797028 | HR-TB | M.canetti;lineage4.9 | None |
ERR161037 | Other | lineage4.9 | None |
SRR29231479 | RR-TB | lineage4.9 | None |
SRR6046720 | HR-TB | lineage4.9;lineage9 | None |