Rv3794 - c.-293T>C
Drug resistance types
53 Sensitive
1 RR-TB
103 HR-TB
5 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| 141 | |
| lineage4 | 53 |
| lineage4.1.2 | 1 |
| lineage4.9 | 7 |
| La1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1.1 | 2 |
| lineage2.2.1 | 2 |
| lineage3.1 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.5 | 1 |
| lineage2.2 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3 | 1 |
| lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 222 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR067681 | HR-TB | None | ERR323043 | HR-TB | None | ERR323063 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323038 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR067699 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1034652 | Other | None | ERR133986 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283025 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3439432 | Other | None | ERR3283027 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR363426 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797046 | HR-TB | None | ERR3797069 | Other | None | ERR4188247 | HR-TB | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4798406 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR6358991 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR702406 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736867 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736874 | HR-TB | None | SRR1158918 | Sensitive | lineage4 | None | ERR8976043 | HR-TB | None | SRR10808399 | Sensitive | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1172234 | Other | None | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172817 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1173778 | Other | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175074 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1184388 | Other | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1196546 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR11081343 | Sensitive | lineage4.1.2.1 | None | ERR11081410 | Sensitive | lineage4.1.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675488 | HR-TB | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675236 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675222 | Other | None | SRR3675270 | HR-TB | None | SRR3675234 | Other | None | SRR3675246 | Sensitive | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675311 | Other | None | ERR176643 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675501 | HR-TB | None | SRR3675510 | Other | None | SRR3675502 | Other | None | ERR212034 | HR-TB | None | SRR3675550 | Other | None | SRR3675545 | HR-TB | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818929 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675571 | HR-TB | None | ERR234659 | HR-TB | None | ERR4818394 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341396 | Other | lineage4 | None | SRR5341456 | Other | None | SRR5341418 | Other | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341425 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341302 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5535933 | HR-TB | None | ERR2693231 | Other | None | SRR6045450 | Other | lineage4.9 | None | SRR6045526 | HR-TB | None | SRR5341469 | Other | lineage4 | None | ERR2653073 | MDR-TB | lineage4.1.1 | None | ERR2693257 | Other | None | SRR6045892 | Sensitive | None | SRR6045555 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6045053 | Other | None | SRR6045952 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6325444 | HR-TB | None | SRR6046397 | Other | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6046492 | Other | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6789626 | Other | None | SRR6511621 | HR-TB | None | ERR294248 | HR-TB | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR502889 | Other | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None |
|---|
