Rv0668 - c.3798C>T
Drug resistance types
79 Sensitive
5 RR-TB
18 HR-TB
10 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 92 |
| lineage4 | 4 |
| lineage1.1.2 | 3 |
| La1.7;M.canetti;lineage4.9 | 4 |
| La3;lineage4.9 | 8 |
| lineage4.1.1.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.9;lineage9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage3 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.8.1 | 2 |
| lineage4.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage6.1.3 | 2 |
| La1;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| M.canetti;lineage4.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2.1 | 5 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.1.1.1 | 1 |
| La3;lineage4 | 1 |
| 1 | |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage1;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1;lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage3.1.3 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 172 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4821655 | HR-TB | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR29231425 | Sensitive | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR6866639 | Other | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR26159066 | Sensitive | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR28351347 | Other | lineage3 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR3675265 | Other | lineage4 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR11465361 | MDR-TB | lineage4.3.4.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR3675446 | RR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR363502 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR6832249 | Sensitive | lineage2.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR28119843 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR400529 | Other | lineage3 | None | ERR137286 | Other | lineage4.9 | None | ERR4799389 | Sensitive | lineage1.1.2 | in | ERR369162 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None |
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