Rv0639 - c.165C>T
Drug resistance types
11 Sensitive
0 RR-TB
13 HR-TB
2 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.1.2 | 6 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.2.BCG | 1 |
| La1.7;lineage4.9 | 6 |
| lineage4.9 | 13 |
| La3 | 2 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 2 |
| La3;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| La1.7 | 2 |
| lineage2.2.1 | 3 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.5 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 51 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR8774341 | Sensitive | lineage4.6.1.2 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR1173633 | Other | lineage4.9 | None | SRR7069127 | Other | La3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675387 | Other | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR3675222 | Other | La1.7 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4818906 | Sensitive | lineage4.6.1.2 | gb | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR4811030 | Other | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR6045777 | Sensitive | lineage4.6.1.2 | gb | ERR9285945 | Sensitive | lineage4.6.1.2 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4821397 | Sensitive | lineage4.6.1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR400541 | Sensitive | lineage3 | gb | SRR5341345 | Sensitive | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR2514578 | Other | La3 | gb | ERR176751 | HR-TB | lineage4.9 | None | ERR4820152 | Sensitive | lineage4.6.1.2 | gb | ERR4819462 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None |
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