Rv3262 - c.1197C>G
Drug resistance types
1 Sensitive
2 RR-TB
22 HR-TB
4 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 15 |
| lineage4.1.1.1 | 1 |
| 14 | |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 5 |
| lineage4.8 | 1 |
| lineage4 | 1 |
| lineage2.1 | 2 |
| lineage2.2.1 | 6 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 7 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2.1.1 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage5.2 | 2 |
| La3;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| La3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 78 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736848 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4800341 | Other | None | SRR29051077 | Other | lineage4.9 | None | ERR4810741 | HR-TB | None | ERR4811142 | RR-TB | None | ERR4811075 | Other | None | ERR4811311 | Other | None | SRR28119753 | Other | lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | None | ERR4817893 | Other | lineage4.8 | None | ERR9117721 | HR-TB | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR20969677 | HR-TB | lineage2.1 | None | ERR4816585 | Other | lineage2.2.1 | None | SRR28119777 | Other | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1184381 | MDR-TB | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4816999 | Other | None | SRR26159043 | Other | lineage4.9 | None | ERR4811105 | HR-TB | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR1172817 | Other | La3 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR25827682 | Other | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR1196768 | MDR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3797029 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None |
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