Rv3596c - c.837C>T


Drug resistance types
30 Sensitive 3 RR-TB 4 HR-TB 19 MDR-TB 0 Pre-XDR-TB 1 XDR-TB 15 Other
lineage Counts
lineage Count
lineage4.9 28
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage3 1
lineage2.2.1;lineage4 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.1.2.1 1
lineage4.3.3 3
M.canetti;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.6.4;lineage4.9 1
lineage2.2.1 5
lineage4.1;lineage4.9 1
M.canetti;lineage4.2 1
lineage1.1.1;lineage4 1
lineage5.1.4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.2.1 1
lineage1;lineage4.9 1
lineage4.5 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.4.1.1 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.1;lineage4.9 1
lineage4.8 1
lineage4 1
lineage3.1;lineage9 1
lineage4.2.1.1;lineage4.3.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 72
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675318 Other lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR12708372 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4769442 Sensitive lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR2512813 Sensitive lineage3 gb
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR1175508 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR2513283 Sensitive lineage5.1.4 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR12708416 Sensitive None
SRR9971114 Other lineage2.2.1 None
SRR21674622 Sensitive lineage2.2.1 None
ERR400320 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR5341345 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR400336 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675387 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
SRR12708419 Other lineage4.3.3 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR28351339 MDR-TB lineage4 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769439 HR-TB lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None