Rv0001 - c.1224C>G
Drug resistance types
6 Sensitive
3 RR-TB
9 HR-TB
1 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.9 | 9 |
| lineage1.1.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.2.1.1 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage2.2.1 | 3 |
| La1.2.BCG | 1 |
| lineage4.8 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 27 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046485 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6045555 | Other | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR29127054 | Sensitive | lineage4.8 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR14164605 | Sensitive | lineage4.3.4.2 | None |
|---|
