Rv2477c - c.492G>A
Drug resistance types
0 Sensitive
12 RR-TB
9 HR-TB
50 MDR-TB
0 Pre-XDR-TB
3 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.1.2.1 | 6 |
| lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 16 |
| La3;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage4.5 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.9 | 6 |
| lineage2.1;lineage4.3.2 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2.1 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage3 | 1 |
| 2 | |
| La3;lineage2.1;lineage4.9 | 1 |
| La1.7.1 | 2 |
| La1.8.1 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.1;lineage4.8 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.1.1.3 | 2 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.2.1.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage1.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 88 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR4821053 | RR-TB | lineage3 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675506 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR13423544 | Other | lineage4.5 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR13861400 | Other | lineage4.9 | None | SRR1162864 | MDR-TB | lineage4.1.2.1 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | ERR3468607 | RR-TB | lineage4.9 | None | ERR4797658 | Other | lineage3.1.2 | in | ERR3275196 | RR-TB | lineage2.2.1 | nl | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675464 | MDR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR1640750 | RR-TB | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | SRR1791696 | RR-TB | La1.8.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR5311089 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4816551 | MDR-TB | lineage4.1.1.3 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6044815 | RR-TB | lineage4.9 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR5311083 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7240492 | MDR-TB | La1.7.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR5311098 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675487 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797023 | MDR-TB | La1.8.1 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26111945 | Other | lineage1.1.3.1 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR3468544 | RR-TB | lineage2.1;lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4188350 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR9786843 | Other | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675507 | RR-TB | lineage4.9 | None |
|---|
