Rv0668 - c.3664_3666delTCGinsAGT


Drug resistance types
13 Sensitive 12 RR-TB 47 HR-TB 38 MDR-TB 3 Pre-XDR-TB 3 XDR-TB 119 Other
lineage Counts
lineage Count
lineage4.9 34
lineage4.9;lineage6.3 3
lineage4.1.3 2
lineage5.2 2
12
M.canetti;lineage4.9 3
lineage2.1;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage2.2.1 12
La3;M.canetti;lineage2.1;lineage4.9 12
lineage1.2.2.1;lineage4.4.1.1 2
lineage6.1.1 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.2 1
lineage1.2.1.2.1 1
La1.2 1
lineage4.6.2.2 1
lineage2.1 1
La1.7;M.canetti;lineage4.9 4
lineage4.2.2.2 1
lineage4.3.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage3.1 1
lineage4.1.2.1 6
La3;lineage4.9 5
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9 4
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 9
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.2;lineage4.9 3
La1.2.BCG;La1.8.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.7 2
La1.7;lineage4.9 5
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.9.1 1
lineage4.7 2
M.canetti;lineage4.2;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9;lineage6.3 6
lineage4.4.1.1 1
lineage3.1.2.2 1
lineage4 2
La2;lineage4.9;lineage9 1
lineage4.1.2.1.1 1
lineage4.8 2
lineage2.2.1.1 4
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.8.1 1
lineage6.1.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.6.3;lineage4.9 3
lineage1.1.1 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.3.4.2.1 2
lineage4.3.4.1 2
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
La2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage6.3.1 2
La1.7;lineage4.3.4.1 1
lineage4.1.1.3 4
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2 1
La1;lineage4.9 1
lineage1.1.2 2
lineage3.1.2 2
La1.7;lineage4.2 1
M.canetti;lineage2.1 1
M.canetti;lineage2.2 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage3.1;lineage9 1
La3;M.canetti;lineage4.9 1
lineage1.2.2.2 1
M.canetti;lineage4.9;lineage9 1
La3;lineage2.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.2.2 1
lineage4.9;lineage9 2
M.canetti;lineage1 1
spoligotype Counts
spoligotype Count
None 235
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR29096150 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4872094 MDR-TB lineage5.2 None
ERR9117709 Other None
SRR3675449 Other M.canetti;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6785527 Sensitive lineage2.2.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR26399255 Sensitive lineage2.2.1 None
ERR3799304 Other lineage6.1.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
SRR23961549 Other La1.2 None
ERR9786645 Other lineage4.6.2.2 None
ERR7821163 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
SRR22251329 Other lineage2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR25827771 Pre-XDR-TB lineage4.2.2.2 None
ERR4813861 Other lineage4.3.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
SRR29097066 Sensitive lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR11252612 Other La3;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR10808730 Other lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR29231479 RR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR3675572 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675222 Other La1.7 None
SRR3675385 Other La1.7;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR18213713 HR-TB None
SRR28119823 Sensitive lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR3797069 Other lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR7496517 Other None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9896144 Other lineage3 None
SRR6045548 Sensitive lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675446 RR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
ERR4816999 Other None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR7496471 Sensitive lineage4 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4816466 HR-TB lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR25827330 MDR-TB lineage4.8 None
SRR1181091 Other lineage2.2.1.1 None
ERR176643 Other La3;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR3675441 Other lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR9787153 Other lineage6.1.3 None
SRR29050859 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR7496472 Other lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR1180226 HR-TB lineage4.9 None
SRR13861322 Other lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR21690362 Other lineage1.1.1 None
ERR4818615 Sensitive None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR176557 Sensitive lineage4.3.4.1 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR6045191 Sensitive lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR13861596 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR1181251 Other lineage2.2.1 None
ERR4815604 Other None
ERR1035157 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR3804162 Sensitive lineage6.3.1 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675236 Other None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR3283044 Other lineage4 None
SRR23961542 Other La1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
ERR9787223 Sensitive lineage6.3.1 None
ERR11049020 Other lineage4.8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR8217918 HR-TB lineage4.9 None
ERR4798139 RR-TB lineage1.1.2 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1180172 Other lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR13266892 MDR-TB lineage3.1.2 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR23961559 Other La1.7;lineage4.2 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR3797070 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
ERR212001 HR-TB None
ERR212033 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
SRR6044815 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR13861326 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR9786604 Other None
SRR17832802 HR-TB lineage3 None
ERR4815752 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR11252736 Other lineage4.9 None
SAMN02585910 Other lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4797285 MDR-TB lineage1.2.2.2 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675214 Other lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4830353 Other La1.7 None
SRR3675267 Other La1.7;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR9786391 Other lineage4.1.2.1 None
SRR15014655 Other M.canetti;lineage1 None
SRR1181328 Other lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None