Rv0668 - c.3664_3666delTCGinsAGT
Drug resistance types
15 Sensitive
5 RR-TB
67 HR-TB
11 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
92 Other
lineage Counts
| lineage | Count |
|---|---|
| 69 | |
| La1.8.1 | 1 |
| lineage3 | 4 |
| lineage4 | 5 |
| lineage4.1.2.1 | 9 |
| lineage4;lineage1.1 | 1 |
| lineage2.2.1 | 18 |
| lineage4.7 | 2 |
| lineage4.1.2 | 1 |
| lineage4.9 | 21 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 2 |
| lineage5.2 | 2 |
| lineage2.2 | 6 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.1;lineage1.2.2.1 | 2 |
| lineage3.1 | 2 |
| La2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.3.4.1;La1.7 | 1 |
| lineage4.8 | 3 |
| La1 | 1 |
| lineage6.1.1 | 2 |
| lineage6.3.1 | 2 |
| lineage3.1.2 | 2 |
| lineage4.1.3 | 2 |
| lineage1.2.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage2 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage2.1 | 1 |
| lineage4.9;La1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| La1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 197 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1035162 | Other | None | SRR7496472 | Other | None | ERR4818021 | Other | La1.8.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4818615 | Other | None | ERR4819280 | Sensitive | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5007188 | Other | lineage4 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341470 | HR-TB | None | SRR5341418 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | ERR4819932 | Other | lineage4.7 | None | SRR6045519 | HR-TB | None | SRR6045399 | Other | None | ERR2679270 | HR-TB | lineage4.1.2 | None | ERR4821578 | Other | lineage4.1.2.1 | None | SRR6044855 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6046397 | Other | None | SRR6046305 | Other | lineage4.9 | None | ERR4830353 | Other | None | SRR6046540 | HR-TB | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6831950 | Other | lineage4.3.3 | None | SRR6046824 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6785267 | Other | lineage2.2.1 | None | ERR323036 | HR-TB | None | SRR6785527 | Sensitive | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR11465711 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR294266 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | SRR7496471 | Sensitive | None | SRR8217918 | HR-TB | None | ERR323055 | HR-TB | None | ERR323038 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | ERR323053 | HR-TB | None | ERR067681 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR1035157 | Other | lineage4.9 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR11049020 | Other | lineage4.8 | None | ERR133986 | HR-TB | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283036 | HR-TB | None | ERR3797071 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3439432 | Other | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797069 | Other | None | ERR3797083 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804162 | Sensitive | lineage6.3.1 | None | ERR4797037 | Pre-XDR-TB | lineage3.1.2 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR403298 | HR-TB | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR5336148 | Other | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR6358837 | HR-TB | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR245758 | Other | lineage4.9.1 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR7821163 | Other | lineage2.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117709 | HR-TB | None | ERR176557 | Sensitive | lineage4.3.4.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786391 | Sensitive | lineage4.1.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786604 | Other | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9786671 | Other | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR987722 | HR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9787223 | Sensitive | lineage6.3.1 | None | SRR069989 | HR-TB | lineage2 | None | ERR9896144 | Other | lineage3 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1172310 | HR-TB | None | SRR1169306 | Other | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR13861326 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861596 | Other | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR19303884 | HR-TB | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR22251329 | Other | lineage2.1 | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR23961549 | Other | La1.2 | None | SRR25827771 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675465 | HR-TB | None | SRR26399255 | Sensitive | lineage2.2.1 | None | SRR28119823 | Sensitive | lineage4.9 | None | SRR25827330 | MDR-TB | lineage4.8 | None | ERR4815604 | HR-TB | None | ERR4813861 | Other | lineage4.3.3 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675482 | HR-TB | None | ERR158583 | HR-TB | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675488 | HR-TB | None | ERR161033 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176740 | HR-TB | None | SRR3675311 | Other | None | SRR3675383 | HR-TB | None | ERR4815752 | Other | lineage4.9 | None | SRR3675502 | Other | None | ERR4816999 | Other | None | ERR4816151 | Other | lineage4.8 | None | SRR3675550 | Other | None | ERR212001 | HR-TB | None | SRR3675571 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675572 | Other | None | ERR4816466 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None |
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