Rv2245 - c.1191A>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
4 Sensitive
1 RR-TB
24 HR-TB
4 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La1.3 | 36 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 3 |
| lineage4.9;lineage7 | 2 |
| 9 | |
| lineage4.9 | 7 |
| lineage4.9;lineage6.3 | 4 |
| La2;M.canetti | 1 |
| lineage3.1;lineage9 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage2.2 | 1 |
| lineage2.2.1 | 2 |
| lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 87 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4769414 | Other | La1.3 | None | ERR4769435 | Sensitive | La1.3 | None | ERR4769437 | Other | La1.3 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR4769473 | Other | La1.3 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4772202 | Other | La1.3 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR1200622 | Other | La1.3 | et | ERR4769445 | Other | La1.3 | None | ERR6358991 | HR-TB | None | ERR4769469 | Other | La1.3 | None | ERR4811311 | Other | None | SRR28119753 | Other | lineage4.9 | None | ERR4772221 | Other | La1.3 | None | ERR176751 | Other | lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR266126 | Sensitive | La2;M.canetti | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR4769398 | Other | La1.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4769484 | Other | La1.3 | None | SRR8063651 | Other | La1.3 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR4769486 | Other | La1.3 | None | ERR4769423 | Other | La1.3 | None | ERR4769481 | Other | La1.3 | None | ERR4769460 | Other | La1.3 | None | ERR4769479 | Other | La1.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4810741 | HR-TB | None | ERR4769415 | Other | La1.3 | None | ERR4811142 | RR-TB | None | ERR4769425 | Other | La1.3 | None | ERR4769440 | Other | La1.3 | None | ERR4769443 | Other | La1.3 | None | ERR4769471 | Other | La1.3 | None | ERR4769496 | Other | La1.3 | None | ERR4811075 | Other | None | ERR8976043 | HR-TB | lineage2.2 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4769461 | Other | La1.3 | None | ERR4830079 | Sensitive | lineage3 | None | ERR4772203 | Other | La1.3 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4769475 | Other | La1.3 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR4772223 | Other | La1.3 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR387051 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR4772201 | Other | La1.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4769441 | Other | La1.3 | None | ERR4769465 | Other | La1.3 | None | ERR4772220 | Other | La1.3 | None | ERR4811105 | HR-TB | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4769432 | Other | La1.3 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR12416824 | HR-TB | None | ERR4769431 | Other | La1.3 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR6325442 | HR-TB | lineage4.1.1;lineage4.9 | None | SRR6325447 | HR-TB | lineage4.1.1.1 | None | SRR8063660 | Other | La1.3 | None | ERR4769434 | Other | La1.3 | None | ERR4769477 | Other | La1.3 | None | ERR987722 | MDR-TB | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR5311098 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
|---|
