TB-Profiler
Home
Upload
SRA data
Rv3795
- c.1917T>C
Drug resistance types
2 Sensitive
13 RR-TB
72 HR-TB
39 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
102 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
34
M.canetti;lineage2.1;lineage4.9
20
14
lineage2.1;lineage4.9
13
La3;M.canetti;lineage2.1;lineage4.9
9
lineage2.1;lineage4.9;lineage6.3
8
lineage2.2.1
7
lineage4.9;lineage6.3
7
M.canetti;lineage2.1;lineage4.9;lineage6.3
5
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
4
Showing 1 to 10 of 89 entries
Previous
1
2
3
4
5
…
9
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
232
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR1023509
Other
lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR1063857
MDR-TB
La2;lineage4.9
None
ERR108471
HR-TB
lineage4.9
None
Showing 1 to 10 of 232 entries
Previous
1
2
3
4
5
…
24
Next