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SRA data
Rv0006
- c.2271C>T
Drug resistance types
3 Sensitive
0 RR-TB
8 HR-TB
0 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
10 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
7
lineage2.1;lineage4.9
3
lineage1.2.1.2.1
2
lineage2.1;lineage4.9;lineage6.3
2
La3;lineage2.1;lineage4.9
1
lineage2.1;lineage4.1.4;lineage4.9
1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
1
1
lineage3.1;lineage9
1
lineage4.4.2
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
23
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR3283018
HR-TB
lineage4.9
None
ERR3283042
Other
lineage4.9
None
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
ERR4797054
Pre-XDR-TB
lineage2.1
None
ERR4811311
Other
lineage2.1;lineage4.9;lineage6.3
None
ERR5311091
Other
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
None
ERR9125858
Sensitive
lineage1.2.1.2.1
None
SRR12416824
HR-TB
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
None
SRR16058476
Sensitive
lineage1.2.1.2.1
None
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