Rv0486 - c.498C>T


Drug resistance types
5 Sensitive 2 RR-TB 19 HR-TB 6 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 80 Other
lineage Counts
lineage Count
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 12
La3;M.canetti;lineage2.2.1 1
lineage2.1 4
La3;lineage2.1;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage1.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 3
14
lineage1.1;lineage4 1
lineage2.2 1
lineage2.1;lineage4.9;lineage6.3 9
lineage2.2.1 11
lineage4.1.2.1 4
lineage4.1.1.1 1
lineage4.3.2 1
lineage4 2
La3 2
lineage4.1.3 2
lineage4.9 16
La1.7;lineage4.9 1
lineage4.4.1.1 2
La1.2.BCG 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage4.9 1
La3;lineage4.8 1
La3;lineage2 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.7 1
lineage3 1
lineage5.2 2
lineage2.1;lineage6.3 2
lineage4.3.4.2.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage6.3 1
lineage6.3.1 1
lineage4.8 2
lineage4.2.2.2 1
lineage4.9;lineage6.3 2
lineage4.1.2 1
lineage3.1;lineage9 1
spoligotype Counts
spoligotype Count
None 119
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1710057 Other lineage2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496517 Other None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
ERR4816585 Other lineage2.2 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR4820335 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675236 Other None
ERR176793 Other lineage4.1.1.1 None
ERR9117805 Other lineage4.3.2 None
ERR3283044 Other lineage4 None
SRR1172728 RR-TB La3 None
ERR9786611 HR-TB lineage4.1.3 None
SRR6785527 Sensitive lineage2.2.1 None
SRR1172234 Other lineage4.9 None
SRR7496509 Other None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR29096246 Sensitive La1.7;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR5863780 Pre-XDR-TB lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR6789621 Other lineage4.9 None
ERR4817060 Other None
ERR4815752 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4818615 Sensitive None
SRR3675232 Other lineage4.1.2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR18213713 HR-TB None
ERR4817893 Other La3;lineage4.8 None
SRR20969677 HR-TB La3;lineage2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196494 MDR-TB None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4816999 Other None
SRR6789626 Other None
SRR1196546 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR4800341 Other lineage3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR3675311 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
SRR28045177 Sensitive lineage2.2.1 None
ERR4819781 Other lineage2.2.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR5153081 Pre-XDR-TB lineage2.2.1 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR5863781 Pre-XDR-TB lineage2.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR5863779 Pre-XDR-TB lineage2.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675214 Other lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR18003019 Other lineage2.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3416776 Other lineage2.1 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR4815604 Other None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046521 Other lineage4.4.1.1 None
ERR2513470 Other lineage4.2.2.2 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR9117709 Other None
SRR3675549 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR3675572 Other None
ERR4818347 Other lineage4.1.2 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675275 Other lineage4.9 None