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SRA data
Rv0486
- c.498C>T
Drug resistance types
5 Sensitive
2 RR-TB
18 HR-TB
6 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
80 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
16
14
lineage2.1;lineage4.9
12
lineage2.2.1
11
lineage2.1;lineage4.9;lineage6.3
8
lineage2.1
4
lineage4.1.2.1
4
La3;lineage2.1;lineage4.9;lineage6.3
3
lineage4.8
2
M.canetti;lineage2.1;lineage4.9
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
118
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR176549
Other
lineage4.3.4.2.1
None
ERR176793
Other
lineage4.1.1.1
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2027263
Other
lineage4
None
ERR2229542
Other
lineage4.8
None
ERR2513470
Other
lineage4.2.2.2
None
ERR2514390
Sensitive
lineage3.1.2.1;lineage4.9
None
ERR323043
Other
lineage2.1;lineage4.9
None
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