Rv0667 - c.2412T>C
Drug resistance types
85 Sensitive
35 RR-TB
47 HR-TB
18 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
76 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 110 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.3 | 5 |
| lineage4.8 | 25 |
| lineage3.1.2.1 | 4 |
| La1.4 | 1 |
| lineage2.2.1 | 23 |
| lineage2;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.1.2.1 | 4 |
| La1.2.BCG | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage2.2.2 | 1 |
| lineage2.2.1;lineage4 | 2 |
| La1;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage4.4.1.1.1 | 2 |
| La1.8.1 | 3 |
| lineage4 | 3 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.1.2 | 3 |
| lineage3;lineage4 | 2 |
| La3;lineage4.9 | 8 |
| lineage4.2.2.2 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2.1 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.7 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| 1 | |
| lineage1.1.1 | 1 |
| lineage4.8.1 | 2 |
| lineage3.1;lineage9 | 1 |
| La3;lineage4 | 1 |
| lineage2;lineage4.9 | 1 |
| La1.7.1 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.6.5 | 2 |
| La1.2 | 1 |
| lineage3 | 4 |
| La1.6;La3;lineage4.9 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.3 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.9;lineage9 | 1 |
| lineage4.4.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| La1.7.X-unk4 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.9.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2;lineage4 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 268 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14782405 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR11465627 | Sensitive | lineage4.3.4.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR978735 | Other | lineage4.8 | None | SRR6044835 | Other | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR1915487 | Other | La1.2.BCG | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4816756 | Other | lineage2.2.1;lineage4 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR978694 | Other | lineage4.8 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR1034791 | RR-TB | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR978751 | Other | lineage4.8 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180440 | Other | lineage4.9 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR978756 | Other | lineage4.8 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR978752 | Other | lineage4.8 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR978748 | Other | lineage4.8 | None | SRR1180148 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR926164 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR10796598 | Other | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4796577 | HR-TB | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR3283028 | Other | La3;lineage4 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4829196 | Other | lineage4.1.2 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046210 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR7851312 | Other | La1.2 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR1180446 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR473332 | Other | lineage4.9 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR7645928 | Other | lineage4.7 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1180345 | Other | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR2513259 | Other | lineage3 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR4799025 | Other | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR16156817 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR3797073 | Other | La1.8.1 | None | ERR4769493 | Other | lineage4.9 | None |
|---|
