Rv0667 - c.2412T>C
Drug resistance types
54 Sensitive
53 RR-TB
67 HR-TB
25 MDR-TB
16 Pre-XDR-TB
1 XDR-TB
101 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 31 |
| lineage4.3 | 1 |
| 50 | |
| lineage4.7 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4 | 34 |
| lineage4.3.4.2.1 | 3 |
| La1.2 | 2 |
| lineage3 | 19 |
| lineage4.8.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.9 | 81 |
| La1 | 2 |
| La1.7.X-unk4 | 1 |
| La1.8.1 | 5 |
| lineage4.6.2.2 | 3 |
| La1.3 | 3 |
| lineage4.9;La1.3 | 2 |
| lineage3.1.2.1 | 5 |
| lineage4.1.2.1 | 6 |
| lineage4.6.5 | 2 |
| lineage6 | 3 |
| lineage2.2 | 2 |
| lineage4.8 | 19 |
| lineage4.6.1.2 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| lineage4.3.3 | 6 |
| lineage4.2.1 | 1 |
| La1.7.1 | 1 |
| lineage2.2.2 | 1 |
| La1.4 | 1 |
| lineage4.4.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3.1 | 1 |
| lineage2.1 | 1 |
| lineage4.5 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage5 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 317 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR7496471 | Sensitive | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7851312 | Other | La1.2 | None | ERR017781 | Other | lineage3 | None | ERR019855 | Other | lineage3 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR1063859 | HR-TB | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3283014 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283041 | Other | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3283047 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439265 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797024 | Other | lineage4.9 | None | ERR3797044 | Other | None | ERR3797014 | Other | None | ERR3797043 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3797017 | Other | None | ERR3797067 | Other | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769408 | Other | La1.3 | None | ERR473332 | Other | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4798262 | HR-TB | La1 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR736816 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9787336 | Other | lineage6 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR20632814 | Sensitive | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692899 | Other | lineage4.9 | None | ERR1750907 | RR-TB | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4815310 | Other | None | SRR3675230 | RR-TB | lineage3 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR4815777 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675234 | Other | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815550 | Other | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR4815556 | RR-TB | lineage3 | None | ERR4815909 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | ERR4817069 | RR-TB | None | ERR4816183 | Other | None | ERR4815944 | HR-TB | lineage4.1.2.1 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR212125 | HR-TB | lineage4 | None | ERR4816470 | Other | lineage3 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR1034791 | RR-TB | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR2229641 | Sensitive | lineage4.8 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR2229366 | Other | lineage4.8 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR4816756 | RR-TB | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229436 | Other | lineage4.8 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR2512986 | Other | lineage3 | None | SRR4035730 | Sensitive | lineage4.1.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818393 | RR-TB | lineage3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2513259 | Other | lineage3 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4818614 | Other | lineage3 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4820265 | Other | lineage4.1.2.1 | None | SRR5341456 | Other | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819456 | Other | lineage4.8 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820586 | Other | lineage3 | gb | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | SRR5341313 | HR-TB | None | ERR2514854 | Other | lineage4.3.3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5341315 | Sensitive | None | ERR6359082 | Other | lineage4.9 | None | ERR2514968 | Other | lineage4.3.3 | None | ERR4820833 | HR-TB | None | ERR2693231 | Other | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4821011 | Other | lineage6 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR2693257 | Other | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR4821214 | RR-TB | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821310 | Other | lineage5 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | ERR323035 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR4829196 | Other | lineage4.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4972536 | XDR-TB | lineage4.3.2 | None | SRR6046359 | Other | lineage4.7 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None |
|---|
