Rv0005 - c.1056A>G


Drug resistance types
19 Sensitive 36 RR-TB 44 HR-TB 101 MDR-TB 2 Pre-XDR-TB 3 XDR-TB 69 Other
lineage Counts
lineage Count
lineage4.9 70
La3;M.canetti;lineage2.1;lineage4.9 12
lineage2.2.1 6
lineage4.1.2.1 5
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.7;M.canetti;lineage4.9 4
La1.7;lineage4.9 6
La3;lineage4.9 14
lineage1.2.1.2 1
M.canetti;lineage2.1;lineage4.9 24
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1.1 1
M.canetti;lineage4.9 6
lineage4.4.1.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.9.1 1
lineage2.2.1.1 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.4.1.2 1
lineage6.1.2 1
lineage2.1;lineage4.9;lineage6.3 2
lineage2;lineage4 1
La1.7.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9 7
lineage4.1.1.3 2
La1.2.BCG 1
lineage4.9;lineage7 3
M.canetti;lineage2.1;lineage4 1
La1.8.1 3
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage3 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La1.2;La1.8.1 1
lineage4.6.2.2 4
M.canetti;lineage4.3.1;lineage4.9 1
La1;lineage4.9 3
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage1.1.1 1
La1;lineage4.1.2 1
lineage2.2.1;lineage4.9 1
M.canetti;lineage2.1 1
lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.3.3 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.2 2
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage4 1
lineage4.6.3;lineage4.9 1
lineage3.1;lineage9 1
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.9 1
lineage2.2 1
La1.7;lineage4.9;lineage7 3
lineage4.9;lineage6.3 1
lineage4.6.4 2
La3;M.canetti;lineage4.8;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage5.2 2
lineage4.1;lineage4.8 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.3.4.2.1 1
La1.7;lineage4.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
M.canetti;lineage2.1;lineage3 1
lineage4 1
lineage2.1;lineage4.9;lineage7 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.4.1.1.1 1
La3;lineage2.1;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3.1.2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;lineage4.9 1
La1.7;lineage3.1;lineage4 1
La3;lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 274
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1063849 HR-TB lineage4.9 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR1166821 RR-TB lineage4.1.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
ERR176751 HR-TB lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736831 Other lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR8665994 RR-TB lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR3283042 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
SRR1165628 Other La3;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1180399 Sensitive lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9787030 RR-TB lineage6.1.2 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1034634 HR-TB lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR1180410 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR212001 HR-TB None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
SRR13423649 Other lineage2.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR3797067 Other La1.8.1 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR926165 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR3283031 Other La3;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR3275220 Other lineage3 nl
SRR3675269 RR-TB lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR1180312 Sensitive lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR926160 Other lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR3283014 Other La3;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR14066533 RR-TB lineage1.1.1 None
ERR133825 HR-TB La1;lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR3283040 HR-TB lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
SRR3675243 MDR-TB lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1175506 Sensitive lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR3283028 Other La3;lineage4 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR6866807 RR-TB lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1165506 Other lineage4.1.2.1 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR926157 Other lineage4.9 None
SRR1791696 RR-TB La1.8.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR4872102 MDR-TB lineage4.6.4 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797063 Other La3;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3283011 Other La3;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872094 MDR-TB lineage5.2 None
ERR5917710 RR-TB lineage4.1.2.1 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR2446566 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR2229143 RR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR2446144 Other lineage3 nl
ERR3801503 Other lineage4.6.2.2 None
SRR10809074 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9119500 MDR-TB lineage5.2 None
ERR3797046 HR-TB lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
ERR4769452 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR161037 HR-TB lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045053 Other lineage4 None
ERR9786843 Other None
SRR1640750 RR-TB None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR9119508 MDR-TB lineage4.6.4 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR212033 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR20969731 Other lineage2.2.1 None
ERR387051 RR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR13861266 Sensitive lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR13861153 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4769521 RR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None