EBG00000313339 - n.2449A>T


Drug resistance types
147 Sensitive 4 RR-TB 77 HR-TB 16 MDR-TB 16 Pre-XDR-TB 0 XDR-TB 89 Other
lineage Counts
lineage Count
lineage4 107
lineage2.2.1 20
74
lineage4.9 72
lineage4.8 7
lineage5.2 2
lineage2.1 4
lineage4.1.2.1 5
lineage2.2.1.1 1
lineage4.3.4.1 3
lineage4.3.4.2.1 3
lineage4.1.2 3
lineage4.3.2.1 2
lineage4.4.1.2 1
lineage4.1.2.1;lineage2.2.1 1
lineage4.6.1.1 2
La1 2
La1.8.1 5
lineage4.6.2.2 3
lineage3 4
lineage4;lineage3.1 1
lineage2 1
lineage1.1.2 3
lineage1.2.2.2 1
lineage4.5 1
lineage2.2.1.2 1
lineage3.1.2.1 1
lineage2.2 1
lineage4.3.4 1
lineage1.1.3.1 1
lineage4.3.4.2 1
lineage6.1.3 1
lineage2.2.2 1
lineage6 1
lineage4.2.1 1
La1.7.1 1
lineage9;lineage3.1 1
lineage4.1 1
lineage4;lineage2.2 1
lineage2.2.1;La3 1
lineage4.9;La3 1
lineage3;lineage2.2.1 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage1.2.1.1 1
lineage3.1.3 1
lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 349
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341323 Sensitive lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341333 HR-TB None
SRR5341345 Sensitive lineage4.9 None
SRR5341469 Other lineage4 None
SRR5341467 Other lineage4 None
SRR5341461 Sensitive lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR6045519 HR-TB None
ERR2693230 Other None
ERR2693231 Other None
ERR2693254 Other None
ERR2693257 Other None
SRR5818448 Other lineage4.9 None
ERR4821644 Sensitive lineage4.9 None
ERR4821655 Sensitive lineage4 None
SRR6045706 Sensitive lineage4 None
SRR6045892 Sensitive None
SRR6046210 Other lineage4 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6044819 Sensitive lineage4.9 None
SRR6045233 HR-TB None
SRR6044835 Sensitive lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6045010 Other lineage4 None
SRR6044838 Other lineage4.9 None
SRR6044876 Sensitive lineage4 None
ERR2693232 Other lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045158 Other lineage4.9 None
SRR6046611 HR-TB lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046644 HR-TB None
SRR6511621 HR-TB None
SRR6046802 Other lineage4 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR4832002 Pre-XDR-TB lineage2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR11465351 Sensitive lineage4.1.2.1 None
ERR4831638 Sensitive None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6982196 Sensitive None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR502510 Sensitive lineage4 None
SRR6981961 Sensitive lineage2.2.1 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
SRR9970980 Other lineage4.1.2 None
ERR502943 HR-TB None
SRR9971293 Sensitive lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
SRR9970979 Sensitive lineage4.8 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9971114 Other lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323107 Other lineage4 None
SRR9971112 Other lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
ERR323045 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323066 Sensitive lineage4 None
ERR11488822 Pre-XDR-TB lineage4.1.2.1;lineage2.2.1 None
ERR323108 HR-TB lineage4 None
ERR323085 Sensitive lineage4 None
ERR1035122 Sensitive None
ERR067699 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1063858 HR-TB None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR1063862 HR-TB None
ERR1063859 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR108471 HR-TB lineage4 None
ERR1063896 Sensitive None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR137286 Sensitive lineage4 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR1213932 Sensitive lineage4.1.2.1 None
ERR133825 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR323115 Sensitive lineage4 None
ERR12015084 Other lineage4.8 None
ERR3283032 HR-TB None
ERR3283014 HR-TB None
ERR3283025 HR-TB None
ERR3283024 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283010 Other La1 None
ERR3283028 Other None
ERR3445503 HR-TB None
ERR3283031 HR-TB None
ERR3283040 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR349264 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349265 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR373945 HR-TB lineage4 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR373947 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR3797044 Other None
ERR3797015 HR-TB None
ERR3797017 Other None
ERR3797043 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797014 Other None
ERR3797048 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797060 Other La1.8.1 None
ERR3797061 Other None
ERR3797073 HR-TB La1.8.1 None
ERR3797068 Other La1.8.1 None
ERR3797063 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797086 Other lineage4.9 None
ERR4024991 Other None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR400326 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR400529 Other lineage3 None
ERR3797087 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400320 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR405209 Sensitive lineage4 None
ERR4188247 HR-TB None
ERR4178226 Sensitive lineage4 None
ERR4796254 Sensitive lineage4 None
ERR473332 Other lineage4 None
ERR4769474 HR-TB lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4796351 MDR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797184 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797313 HR-TB None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4797350 Sensitive lineage4.9 None
ERR4798099 Other None
ERR4798262 HR-TB La1 None
ERR4799378 Sensitive lineage4 None
ERR4798431 HR-TB None
ERR4811031 Sensitive lineage4.5 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4800341 Other lineage3 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4810624 HR-TB lineage2.2 None
ERR4812155 Sensitive None
ERR4811030 Sensitive None
ERR6865502 Sensitive lineage4 None
ERR6358991 HR-TB None
ERR6866022 Other None
ERR736817 HR-TB lineage4.3.4 None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR702404 HR-TB None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR736856 HR-TB lineage4 None
ERR736875 HR-TB lineage4 None
ERR736834 Sensitive lineage4 None
ERR736835 HR-TB None
ERR736848 HR-TB None
ERR736872 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9119669 HR-TB None
ERR970445 MDR-TB lineage2.2.1 None
ERR970413 MDR-TB lineage2.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786597 Sensitive lineage4.6.2.2 None
SRR10808399 Sensitive lineage4 None
ERR9787256 Other lineage6.1.3 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
SRR10315567 Other lineage2.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787362 Sensitive lineage6 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR1158918 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10809074 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR1173568 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR12416824 HR-TB None
SRR1180996 HR-TB lineage4 None
SRR11972367 Sensitive lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR14801749 Sensitive None
SRR16156804 RR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR16157123 Other lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR1792478 HR-TB La1.7.1 None
SRR19295647 Sensitive lineage4.9 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR8692759 Other lineage4.9 None
SRR25827682 Other None
ERR11081258 Other lineage4.8 None
SRR12708416 Sensitive lineage4.1 None
SRR8692783 Other lineage4.9 None
SRR8692854 Other lineage4.9 None
SRR8692810 Other lineage4.9 None
SRR8692807 Other lineage4.9 None
SRR8692822 Other lineage4.9 None
SRR8692885 Other lineage4.9 None
SRR8692858 Sensitive lineage4.9 None
SRR8692881 Other lineage4.9 None
SRR8692898 Other lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692771 Other lineage4.9 None
SRR8692825 Other lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692882 HR-TB lineage4.9 None
SRR8692878 Other lineage4.9 None
SRR8692791 Other lineage4.9 None
SRR8692894 Other lineage4.9 None
SRR8692776 Other lineage4.9 None
SRR8692867 Other lineage4.9 None
SRR8692831 Other lineage4.9 None
SRR8692844 Other lineage4.9 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR8692887 Other None
SRR26399973 Other lineage4.9;La3 None
SRR26159063 Sensitive lineage4.9 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
SRR26159043 Other lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
ERR176779 HR-TB None
ERR176778 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675477 Other lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
SRR3675488 HR-TB None
SRR3675209 Sensitive lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675222 Other None
SRR3675229 Other lineage4 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR702405 Sensitive lineage2.1 None
SRR3675246 Sensitive lineage4 None
ERR181824 HR-TB lineage4 None
SRR3675292 Sensitive lineage4 None
SRR3675283 Sensitive lineage4.9 None
SRR3675266 Sensitive lineage4.9 None
SRR3675509 Other lineage4.9 None
ERR176651 HR-TB None
SRR3675318 Other lineage4.9 None
ERR181887 HR-TB None
SRR3675514 Sensitive lineage4.9 None
SRR3675537 Sensitive lineage4.9 None
SRR3675522 Other None
SRR3675527 RR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
ERR2229080 Sensitive lineage4.8 None
SRR5341422 HR-TB lineage2.1 None
SRR3675548 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4 None
ERR2229198 MDR-TB lineage4.8 None
ERR212121 HR-TB None
ERR212138 HR-TB lineage4 None
ERR245675 Sensitive lineage1.1.2 None
SRR5341384 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818110 Sensitive lineage4.9 None
ERR234659 HR-TB None
ERR2228818 Sensitive lineage4.8 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818920 Sensitive lineage4.9 None
ERR4819051 Other lineage4 None
SRR5341453 Sensitive None
ERR2513470 Other lineage4.2.2.2 None
SRR5341373 HR-TB lineage4 None
SRR5341366 Sensitive lineage4 None
SRR5341375 Other lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR5341396 Other lineage4 None
SRR5341387 Other lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341400 HR-TB lineage4 None
SRR5341432 HR-TB lineage4 None
SRR5341437 Sensitive lineage4.9 None
SRR5341408 Sensitive lineage3 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341425 Other lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341296 Sensitive lineage4.9 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341302 HR-TB None
SRR5341303 RR-TB lineage4 None
SRR5341313 HR-TB None
SRR5341308 Sensitive lineage4 None
SRR5341315 Sensitive None
SRR5341310 Other lineage1.1.2 None