Rv1908c - c.495T>C


Drug resistance types
22 Sensitive 0 RR-TB 64 HR-TB 67 MDR-TB 20 Pre-XDR-TB 2 XDR-TB 25 Other
lineage Counts
lineage Count
lineage4.1.1.1 61
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
M.canetti;lineage2.1;lineage3 1
lineage4.4.1.1 5
19
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9 12
lineage4.1.2.1 2
La1.7;M.canetti;lineage4.9 1
lineage4.9 5
M.canetti;lineage2.1;lineage4.9 21
lineage3.1;lineage9 1
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage2.2.2 1
La3;lineage2.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.2 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La3;M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage4.2 1
La1.2.BCG 1
M.canetti;lineage2.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 200
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR29017578 MDR-TB lineage4.1.1.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR1213945 HR-TB lineage4.1.1.1 bd
SRR7131079 Sensitive lineage4.4.1.1 None
SRR29017080 MDR-TB lineage4.1.1.1 None
ERR4553485 MDR-TB None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4553513 MDR-TB None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4553604 MDR-TB None
SRR29124299 Other lineage4.4.1.1 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162864 Other lineage4.1.2.1 None
SRR6797426 HR-TB lineage4.1.1.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6797627 Pre-XDR-TB lineage4.1.1.1 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4553810 MDR-TB None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820252 Sensitive lineage4.1.1.1 gb
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR069978 HR-TB lineage2.2.2 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR13264957 Pre-XDR-TB lineage4.1.1.1 None
ERR4553618 MDR-TB None
ERR13264939 Pre-XDR-TB lineage4.1.1.1 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR4423149 Pre-XDR-TB lineage4.1.1.1 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2510421 Pre-XDR-TB lineage4.1.1.1 pk
SRR22249996 Sensitive lineage4.1.1.1 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR6797637 HR-TB lineage4.1.1.1 None
ERR4553769 MDR-TB None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4553683 Pre-XDR-TB lineage4.1.1.1 None
ERR4553831 HR-TB None
ERR4553848 MDR-TB lineage4.1.1.1 None
SRR29016886 MDR-TB lineage4.1.1.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR4553949 Pre-XDR-TB lineage4.1.1.1 None
SRR22250030 Sensitive lineage4.1.1.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820061 Sensitive lineage4.1.1.1 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR29017223 MDR-TB lineage4.1.1.1 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR29017221 MDR-TB lineage4.1.1.1 None
SRR17658015 MDR-TB lineage4.1.1.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR29341513 Other lineage4.4.1.1 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR29017393 Pre-XDR-TB lineage4.1.1.1 None
ERR4553712 MDR-TB None
ERR4553932 Pre-XDR-TB None
ERR4553855 MDR-TB None
ERR4553863 Pre-XDR-TB None
ERR4553798 MDR-TB None
ERR4553700 MDR-TB None
SRR29289279 Pre-XDR-TB lineage4.1.1.1 None
ERR4553467 MDR-TB None
SRR29124327 Other lineage4.4.1.1 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045920 Sensitive lineage4.1.1.1 gb
ERR4553917 MDR-TB lineage4.1.1.1 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR30182459 Sensitive lineage4.1.1.1 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR29017163 MDR-TB lineage4.1.1.1 None
SRR29017586 Pre-XDR-TB lineage4.1.1.1 None
SRR29016859 MDR-TB lineage4.1.1.1 None
ERR3283042 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4553457 MDR-TB None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4818007 Sensitive lineage4.1.1.1 gb
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR2100325 HR-TB lineage4.1.1.1 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR4818473 Sensitive lineage4.1.1.1 gb
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR4817419 Sensitive lineage4.1.1.1 None
SRR29017059 Pre-XDR-TB lineage4.1.1.1 None
SRR29017448 Pre-XDR-TB lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4553981 MDR-TB None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4816331 Sensitive lineage4.1.1.1 None
SRR22251782 Sensitive lineage4.1.1.1 None
ERR4817044 Other lineage4.1.1.1 None
ERR4816466 HR-TB lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6797389 MDR-TB lineage4.1.1.1 None
ERR176751 Other lineage4.9 None
ERR1213950 MDR-TB lineage4.1.1.1 bd
SRR29017204 Pre-XDR-TB lineage4.1.1.1 None
SRR29017617 MDR-TB lineage4.1.1.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR6797612 HR-TB lineage4.1.1.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4820084 Sensitive lineage4.1.1.1 None
SRR6797272 MDR-TB lineage4.1.1.1 None
ERR3132235 HR-TB lineage4.1.1.1 None
ERR4553886 Pre-XDR-TB None
ERR4553879 MDR-TB None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4553894 XDR-TB None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR28045952 Sensitive lineage4.1.1.1 None
ERR4798699 Sensitive lineage4.1.1.1 in
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR29017631 Pre-XDR-TB lineage4.1.1.1 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR22250203 Sensitive lineage4.1.1.1 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR3132270 MDR-TB lineage4.1.1.1 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR29016874 Pre-XDR-TB lineage4.1.1.1 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4798741 MDR-TB lineage4.1.1.1 in
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR233390 Sensitive lineage4.1.1.1 np
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4829303 Sensitive lineage4.4.1.1 None
SRR4423144 Pre-XDR-TB lineage4.1.1.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR552752 Sensitive lineage4.1.1.1 de
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4818370 Other lineage4.1.1.1 None
ERR4817336 Sensitive lineage4.1.1.1 gb
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2503561 Sensitive lineage4.1.1.1 fi
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR114477 HR-TB lineage4.1.1.1 None
ERR4814570 Sensitive lineage4.1.1.1 gb