Rv1908c - c.495T>C


Drug resistance types
21 Sensitive 0 RR-TB 30 HR-TB 110 MDR-TB 10 Pre-XDR-TB 2 XDR-TB 5 Other
lineage Counts
lineage Count
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.9;lineage6.3 1
lineage4.1.1.1 42
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage4.9 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.9 5
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage2.1;lineage4.9 21
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage2.1;lineage4.9 12
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.4.1.1 2
19
lineage2.1;lineage4.9 3
La1.7;M.canetti;lineage4.9 1
lineage2.2.2 1
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;M.canetti;lineage4.9 1
lineage4.1.2.1 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.2 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage2.1;lineage3 1
La1.2.BCG 1
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage3.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage4.9;lineage9 1
lineage3.1;lineage9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 178
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR22250030 Sensitive lineage4.1.1.1 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR17658015 MDR-TB lineage4.1.1.1 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4817336 Sensitive lineage4.1.1.1 gb
ERR4798699 Sensitive lineage4.1.1.1 in
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675243 MDR-TB lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3132270 MDR-TB lineage4.1.1.1 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6797426 HR-TB lineage4.1.1.1 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR7131079 Sensitive lineage4.4.1.1 None
ERR4553769 MDR-TB None
ERR4553712 MDR-TB None
ERR4553932 Pre-XDR-TB None
ERR4553855 MDR-TB None
ERR4553485 MDR-TB None
ERR4553831 HR-TB None
ERR4553618 MDR-TB None
ERR4553894 XDR-TB None
ERR4553457 MDR-TB None
ERR4553700 MDR-TB None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR069978 HR-TB lineage2.2.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4829303 Sensitive lineage4.4.1.1 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2503561 Sensitive lineage4.1.1.1 fi
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6797637 HR-TB lineage4.1.1.1 None
SRR6797627 Pre-XDR-TB lineage4.1.1.1 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4553949 Pre-XDR-TB lineage4.1.1.1 None
ERR4816331 Sensitive lineage4.1.1.1 None
ERR4820252 Sensitive lineage4.1.1.1 gb
ERR176751 HR-TB lineage4.9 None
ERR1213945 HR-TB lineage4.1.1.1 bd
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR6797389 MDR-TB lineage4.1.1.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162864 MDR-TB lineage4.1.2.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR1213950 MDR-TB lineage4.1.1.1 bd
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR2510421 Pre-XDR-TB lineage4.1.1.1 pk
ERR4817419 Sensitive lineage4.1.1.1 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR114477 HR-TB lineage4.1.1.1 None
ERR4814570 Sensitive lineage4.1.1.1 gb
ERR4553917 MDR-TB lineage4.1.1.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6797272 MDR-TB lineage4.1.1.1 None
ERR3132235 HR-TB lineage4.1.1.1 None
ERR4553886 Pre-XDR-TB None
ERR4553879 MDR-TB None
SRR28045952 Sensitive lineage4.1.1.1 None
ERR4553513 MDR-TB None
ERR4553604 MDR-TB None
ERR4553467 MDR-TB None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR4818007 Sensitive lineage4.1.1.1 gb
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR6797612 HR-TB lineage4.1.1.1 None
ERR4820084 Sensitive lineage4.1.1.1 None
SRR6045920 Sensitive lineage4.1.1.1 gb
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820061 Sensitive lineage4.1.1.1 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4553848 MDR-TB lineage4.1.1.1 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR4423144 Pre-XDR-TB lineage4.1.1.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR552752 Sensitive lineage4.1.1.1 de
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3283042 HR-TB lineage4.9 None
ERR4818370 Other lineage4.1.1.1 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4553683 Pre-XDR-TB lineage4.1.1.1 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4817044 Other lineage4.1.1.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR4423149 Pre-XDR-TB lineage4.1.1.1 None
SRR22250203 Sensitive lineage4.1.1.1 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818473 Sensitive lineage4.1.1.1 gb
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4798741 MDR-TB lineage4.1.1.1 in
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR4553810 MDR-TB None
ERR4553981 MDR-TB None
ERR4553863 Pre-XDR-TB None
ERR4553798 MDR-TB None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR233390 Sensitive lineage4.1.1.1 np
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR2100325 HR-TB lineage4.1.1.1 None
SRR22249996 Sensitive lineage4.1.1.1 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR22251782 Sensitive lineage4.1.1.1 None